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ATU_RS23075 D-nopaline dehydrogenase [ Agrobacterium fabrum str. C58 ]

Gene ID: 1137338, updated on 27-Aug-2024

Summary

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Gene symbol
ATU_RS23075
Gene description
D-nopaline dehydrogenase
Locus tag
ATU_RS23075
Gene type
protein coding
Organism
Agrobacterium fabrum str. C58 (strain: C58, culture-collection: ATCC:33970, type-material: type strain of Agrobacterium fabrum)
Lineage
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex
Old locus tag
AGR_pTi_53; Atu6015
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Genomic context

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Location:
plasmid: Ti
Sequence:
NC_003065.3 (23231..24472, complement)

NC_003065.3Genomic Context describing neighboring genes Neighboring gene RolB family protein Neighboring gene RolB family protein Neighboring gene ornithine cyclodeaminase Neighboring gene NAD/NADP octopine/nopaline dehydrogenase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003065.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Nopaline synthase: transcript mapping and DNA sequence. Depicker A, et al. J Mol Appl Genet, 1982. PMID 7153689
  2. Structure and transcription of the nopaline synthase gene region of T-DNA. Bevan M, et al. Nucleic Acids Res, 1983 Jan 25. PMID 6298724, Free PMC Article
  3. The genome of the natural genetic engineer Agrobacterium tumefaciens C58. Wood DW, et al. Science, 2001 Dec 14. PMID 11743193
  4. Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58. Goodner B, et al. Science, 2001 Dec 14. PMID 11743194

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
D-nopaline dehydrogenase
WP_010974826.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003065.3 Reference assembly

    Range
    23231..24472 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010974826.1 MULTISPECIES: D-nopaline dehydrogenase [Rhizobium/Agrobacterium group]

    See identical proteins and their annotated locations for WP_010974826.1

    UniProtKB/TrEMBL
    A0A2Z2PK48, A0A2Z2PML8, A0A2Z2PQA4, A0A4Z1QTM0, A9CL08, L0HQZ4
Nucleotide Protein
Heading Accession and Version