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IRF2 interferon regulatory factor 2 [ Bos indicus x Bos taurus (hybrid cattle) ]

Gene ID: 113885094, updated on 15-Mar-2024

Summary

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Gene symbol
IRF2
Gene description
interferon regulatory factor 2
See related
Ensembl:ENSBIXG00005015556
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus x Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See IRF2 in Genome Data Viewer
Location:
chromosome: 27
Exon count:
10
Annotation release Status Assembly Chr Location
100 current UOA_Brahman_1 (GCF_003369695.1) 27 NC_040102.1 (14836186..14919871, complement)

Chromosome 27 - NC_040102.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113884766 Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase 6 Neighboring gene uncharacterized LOC113884767 Neighboring gene uncharacterized LOC113884934 Neighboring gene uncharacterized LOC113884972 Neighboring gene uncharacterized LOC113884973 Neighboring gene transfer RNA cysteine (anticodon GCA)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_040102.1 Chromosome 27 Reference UOA_Brahman_1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
interferon regulatory factor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus x Bos taurus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UOA_Brahman_1

Genomic

  1. NC_040102.1 Reference UOA_Brahman_1

    Range
    14836186..14919871 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027530263.1 → XP_027386064.1  interferon regulatory factor 2

    UniProtKB/TrEMBL
    A0A4W2DTD8
    Related
    ENSBIXP00005011053.1, ENSBIXT00005019728.1

  2. XM_027530264.1 → XP_027386065.1  interferon regulatory factor 2

    UniProtKB/TrEMBL
    A0A4W2DTD8
    Related
    ENSBIXP00005011039.1, ENSBIXT00005019706.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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