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Hspb7 heat shock protein family B (small) member 7 [ Marmota flaviventris (yellow-bellied marmot) ]

Gene ID: 114105391, updated on 15-Mar-2024

Summary

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Gene symbol
Hspb7
Gene description
heat shock protein family B (small) member 7
See related
EnsemblRapid:ENSMFVG00000011125
Gene type
protein coding
RefSeq status
MODEL
Organism
Marmota flaviventris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
Orthologs
human mouse all
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Genomic context

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See Hspb7 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current GSC_YBM_2.0 (GCF_003676075.2) Unplaced Scaffold NW_023144788.1 (1906797..1908943, complement)
100 previous assembly ASM367607v1 (GCF_003676075.1) Unplaced Scaffold NW_020963264.1 (1906855..1909001, complement)

NW_023144788.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 17 Neighboring gene steroid receptor associated and regulated protein Neighboring gene chloride channel protein ClC-Kb Neighboring gene family with sequence similarity 131 member C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in heart development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heat shock protein beta-7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Marmota flaviventris Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GSC_YBM_2.0 Primary Assembly

Genomic

  1. NW_023144788.1 Reference GSC_YBM_2.0 Primary Assembly

    Range
    1906797..1908943 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027951849.1 → XP_027807650.1  heat shock protein beta-7 isoform X6

  2. XM_027951846.1 → XP_027807647.1  heat shock protein beta-7 isoform X4

  3. XM_027951844.1 → XP_027807645.1  heat shock protein beta-7 isoform X2

  4. XM_027951843.1 → XP_027807644.1  heat shock protein beta-7 isoform X1

  5. XM_027951848.1 → XP_027807649.1  heat shock protein beta-7 isoform X5

  6. XM_027951850.1 → XP_027807651.1  heat shock protein beta-7 isoform X7

  7. XM_027951845.1 → XP_027807646.1  heat shock protein beta-7 isoform X3

    Related
    ENSMFVP00000018207.1, ENSMFVT00000020209.1
    Conserved Domains (1) summary
    cd06479
    Location:75 → 155
    ACD_HspB7_like; Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB7, also known as cardiovascular small heat shock protein (cvHsp), and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect ...
Nucleotide Protein
Heading Accession and Version

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