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Pla2g2e phospholipase A2 group IIE [ Marmota flaviventris (yellow-bellied marmot) ]

Gene ID: 114105464, updated on 18-Sep-2024

Summary

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Gene symbol
Pla2g2e
Gene description
phospholipase A2 group IIE
See related
EnsemblRapid:ENSMFVG00000007699
Gene type
protein coding
RefSeq status
MODEL
Organism
Marmota flaviventris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
Orthologs
human mouse all
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Genomic context

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See Pla2g2e in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current GSC_YBM_2.0 (GCF_003676075.2) Unplaced Scaffold NW_023144788.1 (4371356..4374874, complement)
100 previous assembly ASM367607v1 (GCF_003676075.1) Unplaced Scaffold NW_020963264.1 (4371756..4375274, complement)

NW_023144788.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 186 Neighboring gene OTU deubiquitinase 3 Neighboring gene uncharacterized LOC114105465

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in arachidonate secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of T cell proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
group IIE secretory phospholipase A2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Marmota flaviventris Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GSC_YBM_2.0 Primary Assembly

Genomic

  1. NW_023144788.1 Reference GSC_YBM_2.0 Primary Assembly

    Range
    4371356..4374874 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027951963.1 → XP_027807764.1  group IIE secretory phospholipase A2

    Related
    ENSMFVP00000012502.1, ENSMFVT00000013933.1
    Conserved Domains (1) summary
    cd00125
    Location:20 → 135
    PLA2c; Phospholipase A2, a family of secretory and cytosolic enzymes; the latter are either Ca dependent or Ca independent. PLA2 cleaves the sn-2 position of the glycerol backbone of phospholipids (PC or phosphatidylethanolamine), usually in a metal-dependent ...
Nucleotide Protein
Heading Accession and Version

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