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LOC11421886 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 [ Medicago truncatula (barrel medic) ]

Gene ID: 11421886, updated on 7-Dec-2023

Summary

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Gene symbol
LOC11421886
Gene description
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1
Locus tag
MtrunA17_Chr3g0085841
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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Genomic context

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See LOC11421886 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 3 NC_053044.1 (7236425..7240075, complement)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 3 NC_016409.2 (6981509..6985178, complement)

Chromosome 3 - NC_053044.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120579482 Neighboring gene protein EARLY RESPONSIVE TO DEHYDRATION 15 Neighboring gene glycosyltransferase-like KOBITO 1 Neighboring gene uncharacterized LOC11418577

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Dual RNA-Seq analysis of Medicago truncatula and the pea powdery mildew Erysiphe pisi uncovers distinct host transcriptional signatures during incompatible and compatible interactions and pathogen effector candidates. Gupta M, et al. Genomics, 2020 May. PMID 31837401
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of oligosaccharyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1
Names
defender against apoptotic death-like protein
putative dolichyl-diphosphooligosaccharide--protein glycotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053044.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    7236425..7240075 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003598849.4 → XP_003598897.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1

    See identical proteins and their annotated locations for XP_003598897.1

    UniProtKB/TrEMBL
    G7J1N4, I3STP6
    Conserved Domains (1) summary
    pfam02109
    Location:10 → 115
    DAD; DAD family
Nucleotide Protein
Heading Accession and Version

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