U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC11445394 uncharacterized LOC11445394 [ Medicago truncatula (barrel medic) ]

Gene ID: 11445394, updated on 22-Apr-2023

Summary

Go to the top of the page Help
Gene symbol
LOC11445394
Gene description
uncharacterized LOC11445394
Locus tag
MtrunA17_Chr6g0451961
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC11445394 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
5
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 6 NC_053047.1 (2418465..2423184)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 4 NC_016410.2 (27095200..27100162)

Chromosome 6 - NC_053047.1Genomic Context describing neighboring genes Neighboring gene two-component response regulator 24 Neighboring gene protein FAR1-RELATED SEQUENCE 11-like Neighboring gene probable galacturonosyltransferase-like 10 Neighboring gene uncharacterized LOC11423781

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Dual RNA-Seq analysis of Medicago truncatula and the pea powdery mildew Erysiphe pisi uncovers distinct host transcriptional signatures during incompatible and compatible interactions and pathogen effector candidates. Gupta M, et al. Genomics, 2020 May. PMID 31837401

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein LOC11445394
Names
Hop-interacting protein THI043

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053047.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    2418465..2423184
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003607001.4 → XP_003607049.1  uncharacterized protein LOC11445394

    See identical proteins and their annotated locations for XP_003607049.1

    UniProtKB/TrEMBL
    G7JJU3
    Conserved Domains (1) summary
    pfam05542
    Location:253 → 353
    DUF760; Protein of unknown function (DUF760)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases