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LOC114644969 zinc finger FYVE domain-containing protein 16-like [ Erpetoichthys calabaricus (reedfish) ]

Gene ID: 114644969, updated on 23-Nov-2023

Summary

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Gene symbol
LOC114644969
Gene description
zinc finger FYVE domain-containing protein 16-like
See related
Ensembl:ENSECRG00000006435 Ensembl:ENSECRG00000013874
Gene type
protein coding
RefSeq status
MODEL
Organism
Erpetoichthys calabaricus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Polypteriformes; Polypteridae; Erpetoichthys
Also known as
zfyve16
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Genomic context

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See LOC114644969 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_02 current fErpCal1.3 (GCF_900747795.2) 7 NC_041400.2 (70858029..71017501)
100 previous assembly fErpCal1.1 (GCF_900747795.1) Unplaced Scaffold NW_021318233.1 (731..23982)

Chromosome 7 - NC_041400.2Genomic Context describing neighboring genes Neighboring gene RAD17 checkpoint clamp loader component Neighboring gene uncharacterized LOC127528856 Neighboring gene coiled-coil domain containing 125 Neighboring gene uncharacterized LOC127528849 Neighboring gene dynein axonemal light chain 1-like Neighboring gene fascin-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in early endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger FYVE domain-containing protein 16-like
Names
zinc finger FYVE-type containing 16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_900747795.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fErpCal1.3 Primary Assembly

Genomic

  1. NC_041400.2 Reference fErpCal1.3 Primary Assembly

    Range
    70858029..71017501
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051929442.1 → XP_051785402.1  zinc finger FYVE domain-containing protein 16-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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