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ccdc125 coiled-coil domain containing 125 [ Erpetoichthys calabaricus (reedfish) ]

Gene ID: 114654258, updated on 15-Mar-2024

Summary

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Gene symbol
ccdc125
Gene description
coiled-coil domain containing 125
See related
Ensembl:ENSECRG00000006472
Gene type
protein coding
RefSeq status
MODEL
Organism
Erpetoichthys calabaricus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Polypteriformes; Polypteridae; Erpetoichthys
Orthologs
human zebrafish all
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Genomic context

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See ccdc125 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_02 current fErpCal1.3 (GCF_900747795.2) 7 NC_041400.2 (70724361..70827412)
100 previous assembly fErpCal1.1 (GCF_900747795.1) 7 NC_041400.1 (12126606..12229264, complement)

Chromosome 7 - NC_041400.2Genomic Context describing neighboring genes Neighboring gene adenylate kinase 6 Neighboring gene RAD17 checkpoint clamp loader component Neighboring gene uncharacterized LOC127528856 Neighboring gene zinc finger FYVE domain-containing protein 16-like Neighboring gene uncharacterized LOC127528849 Neighboring gene dynein axonemal light chain 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of Rho protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of cell motility IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coiled-coil domain-containing protein 125

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_900747795.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fErpCal1.3 Primary Assembly

Genomic

  1. NC_041400.2 Reference fErpCal1.3 Primary Assembly

    Range
    70724361..70827412
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028804685.2 → XP_028660518.1  coiled-coil domain-containing protein 125

    UniProtKB/TrEMBL
    A0A8C4S0L2
    Related
    ENSECRP00000009656.1
    Conserved Domains (1) summary
    COG1196
    Location:107 → 249
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  2. XM_051930121.1 → XP_051786081.1  coiled-coil domain-containing protein 125

    UniProtKB/TrEMBL
    A0A8C4S0L2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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