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LOC115155528 ADP-ribosylation factor-like protein 4C [ Salmo trutta (river trout) ]

Gene ID: 115155528, updated on 21-Dec-2023

Summary

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Gene symbol
LOC115155528
Gene description
ADP-ribosylation factor-like protein 4C
See related
Ensembl:ENSSTUG00000007658
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC115155528 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
1
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 20 NC_042976.1 (10129710..10131718)

Chromosome 20 - NC_042976.1Genomic Context describing neighboring genes Neighboring gene reticulon-4 receptor-like 2 Neighboring gene SH3 domain-binding protein 4 Neighboring gene transfer RNA threonine (anticodon UGU) Neighboring gene protein ADP-ribosylarginine hydrolase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042976.1 Chromosome 20 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endocytic recycling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ADP-ribosylation factor-like protein 4C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042976.1 Reference fSalTru1.1 Primary Assembly

    Range
    10129710..10131718
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029702211.1 → XP_029558071.1  ADP-ribosylation factor-like protein 4C

    UniProtKB/TrEMBL
    A0A673X8V0
    Related
    ENSSTUP00000016841.1, ENSSTUT00000017747.1
    Conserved Domains (1) summary
    cd04152
    Location:11 → 192
    Arl4_Arl7; Arf-like 4 (Arl4) and 7 (Arl7) GTPases
Nucleotide Protein
Heading Accession and Version

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