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Gm52685 predicted gene, 52685 [ Mus musculus (house mouse) ]

Gene ID: 115489910, updated on 17-Aug-2024

Summary

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Official Symbol
Gm52685provided by MGI
Official Full Name
predicted gene, 52685provided by MGI
Primary source
MGI:MGI:6367013
See related
AllianceGenome:MGI:6367013
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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Genomic context

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See Gm52685 in Genome Data Viewer
Location:
4 D3; 4
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (139797468..139800579)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (140070157..140073268)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4933427I22 gene Neighboring gene predicted gene 1667 Neighboring gene STARR-seq mESC enhancer starr_11844 Neighboring gene STARR-seq mESC enhancer starr_11846 Neighboring gene kelch domain containing 7A Neighboring gene microRNA 2139 Neighboring gene STARR-seq mESC enhancer starr_11847 Neighboring gene immunoglobulin superfamily, member 21 Neighboring gene VISTA enhancer mm1730 Neighboring gene STARR-seq mESC enhancer starr_11853 Neighboring gene STARR-seq mESC enhancer starr_11854 Neighboring gene STARR-seq mESC enhancer starr_11855 Neighboring gene predicted gene 13029 Neighboring gene predicted gene, 33542

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
  5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    139797468..139800579
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_003955142.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version