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armt1 acidic residue methyltransferase 1 [ Sparus aurata (gilthead seabream) ]

Gene ID: 115573816, updated on 17-Mar-2024

Summary

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Gene symbol
armt1
Gene description
acidic residue methyltransferase 1
See related
Ensembl:ENSSAUG00010011723
Gene type
protein coding
RefSeq status
MODEL
Organism
Sparus aurata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Spariformes; Sparidae; Sparus
Orthologs
human zebrafish all
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Genomic context

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See armt1 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
6
Annotation release Status Assembly Chr Location
100 current fSpaAur1.1 (GCF_900880675.1) 22 NC_044208.1 (18358080..18366660, complement)

Chromosome 22 - NC_044208.1Genomic Context describing neighboring genes Neighboring gene spectrin repeat containing, nuclear envelope 1a Neighboring gene estrogen receptor 1 Neighboring gene zinc finger and BTB domain containing 2b Neighboring gene A kinase (PRKA) anchor protein 12b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044208.1 Chromosome 22 Reference fSpaAur1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA damage response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
damage-control phosphatase ARMT1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sparus aurata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSpaAur1.1 Primary Assembly

Genomic

  1. NC_044208.1 Reference fSpaAur1.1 Primary Assembly

    Range
    18358080..18366660 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030404813.1 → XP_030260673.1  damage-control phosphatase ARMT1

    UniProtKB/TrEMBL
    A0A671VKS4, A0A671VN35
    Conserved Domains (1) summary
    pfam01937
    Location:27 → 427
    DUF89; Protein of unknown function DUF89

  2. XM_030404812.1 → XP_030260672.1  damage-control phosphatase ARMT1

    UniProtKB/TrEMBL
    A0A671VKS4, A0A671VN35
    Related
    ENSSAUP00010027107.1, ENSSAUT00010028604.1
    Conserved Domains (1) summary
    pfam01937
    Location:27 → 427
    DUF89; Protein of unknown function DUF89
Nucleotide Protein
Heading Accession and Version

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