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akap12b A kinase (PRKA) anchor protein 12b [ Sparus aurata (gilthead seabream) ]

Gene ID: 115573820, updated on 17-Mar-2024

Summary

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Gene symbol
akap12b
Gene description
A kinase (PRKA) anchor protein 12b
See related
Ensembl:ENSSAUG00010011727
Gene type
protein coding
RefSeq status
MODEL
Organism
Sparus aurata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Spariformes; Sparidae; Sparus
Also known as
akap12
Orthologs
zebrafish all
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Genomic context

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See akap12b in Genome Data Viewer
Location:
chromosome: 22
Exon count:
5
Annotation release Status Assembly Chr Location
100 current fSpaAur1.1 (GCF_900880675.1) 22 NC_044208.1 (18376602..18427767, complement)

Chromosome 22 - NC_044208.1Genomic Context describing neighboring genes Neighboring gene acidic residue methyltransferase 1 Neighboring gene zinc finger and BTB domain containing 2b Neighboring gene methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like Neighboring gene syntaxin 11b, tandem duplicate 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044208.1 Chromosome 22 Reference fSpaAur1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calmodulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase A binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of protein kinase A signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of protein kinase C signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
A-kinase anchor protein 12
Names
A-kinase anchoring protein 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sparus aurata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSpaAur1.1 Primary Assembly

Genomic

  1. NC_044208.1 Reference fSpaAur1.1 Primary Assembly

    Range
    18376602..18427767 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030404824.1 → XP_030260684.1  A-kinase anchor protein 12 isoform X1

    Conserved Domains (2) summary
    PTZ00121
    Location:99 → 820
    PTZ00121; MAEBL; Provisional
    PRK10811
    Location:1228 → 1385
    rne; ribonuclease E; Reviewed

  2. XM_030404825.1 → XP_030260685.1  A-kinase anchor protein 12 isoform X2

    UniProtKB/TrEMBL
    A0A671VJL1
    Related
    ENSSAUP00010027113.1, ENSSAUT00010028610.1
    Conserved Domains (2) summary
    PTZ00121
    Location:37 → 758
    PTZ00121; MAEBL; Provisional
    PRK10811
    Location:1166 → 1323
    rne; ribonuclease E; Reviewed
Nucleotide Protein
Heading Accession and Version

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