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LOC115962198 anthocyanidin 5,3-O-glucosyltransferase-like [ Quercus lobata ]

Gene ID: 115962198, updated on 14-Dec-2023

Summary

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Gene symbol
LOC115962198
Gene description
anthocyanidin 5,3-O-glucosyltransferase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Quercus lobata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Genomic context

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See LOC115962198 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
1
Annotation release Status Assembly Chr Location
100 current ValleyOak3.0 (GCF_001633185.1) 9 NC_044912.1 (12313803..12315586, complement)

Chromosome 9 - NC_044912.1Genomic Context describing neighboring genes Neighboring gene trafficking protein particle complex subunit 1 Neighboring gene uncharacterized LOC115959390 Neighboring gene protein SGT1 homolog Neighboring gene uncharacterized LOC115961234

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044912.1 Chromosome 9 Reference ValleyOak3.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anthocyanidin 5,3-O-glucosyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Quercus lobata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ValleyOak3.0

Genomic

  1. NC_044912.1 Reference ValleyOak3.0

    Range
    12313803..12315586 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031081095.1 → XP_030936955.1  anthocyanidin 5,3-O-glucosyltransferase-like

    UniProtKB/TrEMBL
    A0A7N2MIB7
    Conserved Domains (1) summary
    cl10013
    Location:2 → 463
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology
Nucleotide Protein
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