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FAS Fas cell surface death receptor [ Aythya fuligula (tufted duck) ]

Gene ID: 116491656, updated on 14-Nov-2024

Summary

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Gene symbol
FAS
Gene description
Fas cell surface death receptor
Gene type
protein coding
RefSeq status
MODEL
Organism
Aythya fuligula
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Aythyinae; Aythya
Orthologs
human mouse all
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Genomic context

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See FAS in Genome Data Viewer
Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
100 current bAytFul2.pri (GCF_009819795.1) 7 NC_045565.1 (19951188..19964681)

Chromosome 7 - NC_045565.1Genomic Context describing neighboring genes Neighboring gene STAM binding protein like 1 Neighboring gene actin alpha 2, smooth muscle Neighboring gene cholesterol 25-hydroxylase Neighboring gene lipase A, lysosomal acid type

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045565.1 Chromosome 7 Reference bAytFul2.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tumor necrosis factor receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activation-induced cell death of T cells IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in extrinsic apoptotic signaling pathway in absence of ligand IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in motor neuron apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in necroptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of stress-activated MAPK cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CD95 death-inducing signaling complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane raft IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tumor necrosis factor receptor superfamily member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aythya fuligula Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bAytFul2.pri Primary Assembly

Genomic

  1. NC_045565.1 Reference bAytFul2.pri Primary Assembly

    Range
    19951188..19964681
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032191801.1 → XP_032047692.1  tumor necrosis factor receptor superfamily member 6 isoform X1

    UniProtKB/TrEMBL
    A0A6J3DEA9
    Conserved Domains (2) summary
    cd08316
    Location:225 → 318
    Death_FAS_TNFRSF6; Death domain of FAS or TNF receptor superfamily member 6
    cl22855
    Location:40 → 168
    TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)

  2. XM_032191802.1 → XP_032047693.1  tumor necrosis factor receptor superfamily member 6 isoform X2

    UniProtKB/TrEMBL
    A0A6J3DE07
    Conserved Domains (2) summary
    cd08316
    Location:214 → 307
    Death_FAS_TNFRSF6; Death domain of FAS or TNF receptor superfamily member 6
    cl22855
    Location:40 → 157
    TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)
Nucleotide Protein
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