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ltb4r leukotriene B4 receptor [ Etheostoma spectabile (orangethroat darter) ]

Gene ID: 116707472, updated on 18-Mar-2024

Summary

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Gene symbol
ltb4r
Gene description
leukotriene B4 receptor
Locus tag
FQN60_006294
Gene type
protein coding
RefSeq status
MODEL
Organism
Etheostoma spectabile
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Etheostomatinae; Etheostoma
Orthologs
zebrafish all
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Genomic context

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See ltb4r in Genome Data Viewer
Location:
chromosome: 19
Exon count:
4
Annotation release Status Assembly Chr Location
100 current UIUC_Espe_1.0 (GCF_008692095.1) 19 NC_045751.1 (7759671..7765466)

Chromosome 19 - NC_045751.1Genomic Context describing neighboring genes Neighboring gene protein mono-ADP-ribosyltransferase PARP14-like Neighboring gene leukotriene B4 receptor 2a Neighboring gene leukotriene B4 receptor 1-like Neighboring gene kelch-like protein 33

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045751.1 Chromosome 19 Reference UIUC_Espe_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables complement receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables leukotriene receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in complement receptor mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipase C-activating G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cytosolic calcium ion concentration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leukotriene B4 receptor 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Etheostoma spectabile Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UIUC_Espe_1.0 Primary Assembly

Genomic

  1. NC_045751.1 Reference UIUC_Espe_1.0 Primary Assembly

    Range
    7759671..7765466
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032544822.1 → XP_032400713.1  leukotriene B4 receptor 1-like

    Conserved Domains (2) summary
    cd14964
    Location:23 → 49
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:22 → 299
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

  2. XM_032544821.1 → XP_032400712.1  leukotriene B4 receptor 1-like

    Conserved Domains (2) summary
    cd14964
    Location:23 → 49
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:22 → 299
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
Nucleotide Protein
Heading Accession and Version

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