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side sidestep [ Odontomachus brunneus ]

Gene ID: 116842681, updated on 10-Oct-2024

Summary

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Gene symbol
side
Gene description
sidestep
Gene type
protein coding
RefSeq status
MODEL
Organism
Odontomachus brunneus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Ponerinae; Ponerini; Odontomachus
Orthologs
fruit fly honey bee all
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Genomic context

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See side in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Obru_v1 (GCF_010583005.1) Unplaced Scaffold NW_022639476.1 (837064..857328)

NW_022639476.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116842717 Neighboring gene serine/threonine-protein kinase gek Neighboring gene uncharacterized LOC116842718 Neighboring gene uncharacterized LOC116842684

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022639476 Unplaced Scaffold Reference Obru_v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hemicentin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odontomachus brunneus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Obru_v1

Genomic

  1. NW_022639476.1 Reference Obru_v1

    Range
    837064..857328
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032812234.1 → XP_032668125.1  hemicentin-2 isoform X1

    Conserved Domains (5) summary
    smart00408
    Location:476 → 544
    IGc2; Immunoglobulin C-2 Type
    cd00063
    Location:560 → 673
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam13927
    Location:376 → 441
    Ig_3; Immunoglobulin domain
    cd00096
    Location:383 → 387
    Ig; Ig strand B [structural motif]
    cl11960
    Location:268 → 345
    Ig; Immunoglobulin domain

  2. XM_032812235.1 → XP_032668126.1  hemicentin-2 isoform X2

    Conserved Domains (5) summary
    smart00408
    Location:476 → 544
    IGc2; Immunoglobulin C-2 Type
    cd00063
    Location:560 → 673
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam13927
    Location:376 → 441
    Ig_3; Immunoglobulin domain
    cd00096
    Location:383 → 387
    Ig; Ig strand B [structural motif]
    cl11960
    Location:268 → 345
    Ig; Immunoglobulin domain
Nucleotide Protein
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