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Zfp36 ZFP36 ring finger protein [ Rattus rattus (black rat) ]

Gene ID: 116892393, updated on 18-Mar-2024

Summary

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Gene symbol
Zfp36
Gene description
ZFP36 ring finger protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus rattus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Orthologs
human mouse all
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Genomic context

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See Zfp36 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Rrattus_CSIRO_v1 (GCF_011064425.1) 2 NC_046155.1 (167615453..167617961)

Chromosome 2 - NC_046155.1Genomic Context describing neighboring genes Neighboring gene PAF1 homolog, Paf1/RNA polymerase II complex component Neighboring gene mediator complex subunit 29 Neighboring gene transfer RNA isoleucine (anticodon UAU) Neighboring gene pleckstrin homology and RhoGEF domain containing G2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046155.1 Chromosome 2 Reference Rrattus_CSIRO_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence of a rat TIS11 cDNA, an immediate early gene induced by growth factors and phorbol esters. Kaneda N, et al. Gene, 1992 Sep 10. PMID 1511903
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mRNA decay activator protein ZFP36

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rattus rattus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rrattus_CSIRO_v1 Primary Assembly

Genomic

  1. NC_046155.1 Reference Rrattus_CSIRO_v1 Primary Assembly

    Range
    167615453..167617961
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032894065.1 → XP_032749956.1  mRNA decay activator protein ZFP36

    Conserved Domains (1) summary
    COG5063
    Location:103 → 195
    CTH1; CCCH-type Zn-finger protein [General function prediction only]
Nucleotide Protein
Heading Accession and Version

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