U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TIA1 TIA1 cytotoxic granule associated RNA binding protein [ Trachypithecus francoisi (Francois's langur) ]

Gene ID: 117099804, updated on 19-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
TIA1
Gene description
TIA1 cytotoxic granule associated RNA binding protein
See related
EnsemblRapid:ENSTFRG00000006484
Gene type
protein coding
RefSeq status
MODEL
Organism
Trachypithecus francoisi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Trachypithecus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TIA1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current Tfra_2.0 (GCF_009764315.1) Unplaced Scaffold NW_022681462.1 (20653440..20689597, complement)

NW_022681462.1Genomic Context describing neighboring genes Neighboring gene high mobility group protein B1-like Neighboring gene chromosome unknown C2orf42 homolog Neighboring gene GTP cyclohydrolase 1 feedback regulatory protein Neighboring gene transfer RNA glycine (anticodon CCC)

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_022681462 Unplaced Scaffold Reference Tfra_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
nucleolysin TIA-1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Trachypithecus francoisi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tfra_2.0 Primary Assembly

Genomic

  1. NW_022681462.1 Reference Tfra_2.0 Primary Assembly

    Range
    20653440..20689597 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033174996.1 → XP_033030887.1  nucleolysin TIA-1 isoform X8

    Conserved Domains (3) summary
    TIGR01628
    Location:4 → 246
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12620
    Location:74 → 146
    RRM3_TIAR; RNA recognition motif 3 (RRM3) found in nucleolysin TIAR and similar proteins
    cl17169
    Location:1 → 41
    RRM_SF; RNA recognition motif (RRM) superfamily

  2. XM_033174990.1 → XP_033030881.1  nucleolysin TIA-1 isoform X6

    Conserved Domains (3) summary
    TIGR01628
    Location:1 → 310
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12620
    Location:138 → 210
    RRM3_TIAR; RNA recognition motif 3 (RRM3) found in nucleolysin TIAR and similar proteins
    cd12618
    Location:28 → 105
    RRM2_TIA1; RNA recognition motif 2 (RRM2) found in nucleolysin TIA-1 isoform p40 (p40-TIA-1) and similar proteins

  3. XM_033239339.1 → XP_033095230.1  nucleolysin TIA-1 isoform X5

    Conserved Domains (3) summary
    cd12620
    Location:149 → 221
    RRM3_TIAR; RNA recognition motif 3 (RRM3) found in nucleolysin TIAR and similar proteins
    cd12618
    Location:39 → 116
    RRM2_TIA1; RNA recognition motif 2 (RRM2) found in nucleolysin TIA-1 isoform p40 (p40-TIA-1) and similar proteins
    cl17169
    Location:1 → 23
    RRM_SF; RNA recognition motif (RRM) superfamily

  4. XM_033239338.1 → XP_033095229.1  nucleolysin TIA-1 isoform X4

    Conserved Domains (3) summary
    cd12620
    Location:203 → 275
    RRM3_TIAR; RNA recognition motif 3 (RRM3) found in nucleolysin TIAR and similar proteins
    cd12615
    Location:8 → 81
    RRM1_TIA1; RNA recognition motif 1 (RRM1) found in nucleolysin TIA-1 isoform p40 (p40-TIA-1) and similar proteins
    cd12618
    Location:93 → 170
    RRM2_TIA1; RNA recognition motif 2 (RRM2) found in nucleolysin TIA-1 isoform p40 (p40-TIA-1) and similar proteins

  5. XM_033239336.1 → XP_033095227.1  nucleolysin TIA-1 isoform X2

    Conserved Domains (3) summary
    cd12620
    Location:214 → 286
    RRM3_TIAR; RNA recognition motif 3 (RRM3) found in nucleolysin TIAR and similar proteins
    cd12615
    Location:8 → 81
    RRM1_TIA1; RNA recognition motif 1 (RRM1) found in nucleolysin TIA-1 isoform p40 (p40-TIA-1) and similar proteins
    cd12618
    Location:104 → 181
    RRM2_TIA1; RNA recognition motif 2 (RRM2) found in nucleolysin TIA-1 isoform p40 (p40-TIA-1) and similar proteins

  6. XM_033239335.1 → XP_033095226.1  nucleolysin TIA-1 isoform X1

    Related
    ENSTFRP00000007553.1, ENSTFRT00000009476.1
    Conserved Domains (3) summary
    cd12620
    Location:214 → 286
    RRM3_TIAR; RNA recognition motif 3 (RRM3) found in nucleolysin TIAR and similar proteins
    cd12615
    Location:8 → 81
    RRM1_TIA1; RNA recognition motif 1 (RRM1) found in nucleolysin TIA-1 isoform p40 (p40-TIA-1) and similar proteins
    cd12618
    Location:104 → 181
    RRM2_TIA1; RNA recognition motif 2 (RRM2) found in nucleolysin TIA-1 isoform p40 (p40-TIA-1) and similar proteins

  7. XM_033174991.1 → XP_033030882.1  nucleolysin TIA-1 isoform X7

    Conserved Domains (2) summary
    cd12620
    Location:113 → 185
    RRM3_TIAR; RNA recognition motif 3 (RRM3) found in nucleolysin TIAR and similar proteins
    cd12618
    Location:3 → 80
    RRM2_TIA1; RNA recognition motif 2 (RRM2) found in nucleolysin TIA-1 isoform p40 (p40-TIA-1) and similar proteins

  8. XM_033174994.1 → XP_033030885.1  nucleolysin TIA-1 isoform X8

    Conserved Domains (3) summary
    TIGR01628
    Location:4 → 246
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12620
    Location:74 → 146
    RRM3_TIAR; RNA recognition motif 3 (RRM3) found in nucleolysin TIAR and similar proteins
    cl17169
    Location:1 → 41
    RRM_SF; RNA recognition motif (RRM) superfamily

  9. XM_033174992.1 → XP_033030883.1  nucleolysin TIA-1 isoform X7

    Conserved Domains (2) summary
    cd12620
    Location:113 → 185
    RRM3_TIAR; RNA recognition motif 3 (RRM3) found in nucleolysin TIAR and similar proteins
    cd12618
    Location:3 → 80
    RRM2_TIA1; RNA recognition motif 2 (RRM2) found in nucleolysin TIA-1 isoform p40 (p40-TIA-1) and similar proteins

  10. XM_033174993.1 → XP_033030884.1  nucleolysin TIA-1 isoform X8

    Conserved Domains (3) summary
    TIGR01628
    Location:4 → 246
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12620
    Location:74 → 146
    RRM3_TIAR; RNA recognition motif 3 (RRM3) found in nucleolysin TIAR and similar proteins
    cl17169
    Location:1 → 41
    RRM_SF; RNA recognition motif (RRM) superfamily

  11. XM_033174997.1 → XP_033030888.1  nucleolysin TIA-1 isoform X8

    Conserved Domains (3) summary
    TIGR01628
    Location:4 → 246
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12620
    Location:74 → 146
    RRM3_TIAR; RNA recognition motif 3 (RRM3) found in nucleolysin TIAR and similar proteins
    cl17169
    Location:1 → 41
    RRM_SF; RNA recognition motif (RRM) superfamily

  12. XM_033239337.1 → XP_033095228.1  nucleolysin TIA-1 isoform X3

    Related
    ENSTFRP00000007596.1, ENSTFRT00000009525.1
    Conserved Domains (3) summary
    cd12620
    Location:203 → 275
    RRM3_TIAR; RNA recognition motif 3 (RRM3) found in nucleolysin TIAR and similar proteins
    cd12615
    Location:8 → 81
    RRM1_TIA1; RNA recognition motif 1 (RRM1) found in nucleolysin TIA-1 isoform p40 (p40-TIA-1) and similar proteins
    cd12618
    Location:93 → 170
    RRM2_TIA1; RNA recognition motif 2 (RRM2) found in nucleolysin TIA-1 isoform p40 (p40-TIA-1) and similar proteins

  13. XM_033174998.1 → XP_033030889.1  nucleolysin TIA-1 isoform X9

    Related
    ENSTFRP00000007651.1, ENSTFRT00000009590.1
    Conserved Domains (2) summary
    cd12615
    Location:8 → 81
    RRM1_TIA1; RNA recognition motif 1 (RRM1) found in nucleolysin TIA-1 isoform p40 (p40-TIA-1) and similar proteins
    cl17169
    Location:104 → 133
    RRM_SF; RNA recognition motif (RRM) superfamily

RNA

  1. XR_004428166.1 RNA Sequence

    Related
    ENSTFRT00000009574.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.