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Gr39a Gustatory receptor 39a [ Drosophila melanogaster (fruit fly) ]

Gene ID: 117346, updated on 4-Jan-2025

Summary

Official Symbol
Gr39aprovided by FlyBase
Official Full Name
Gustatory receptor 39aprovided by FlyBase
Primary source
FLYBASE:FBgn0264556
Locus tag
Dmel_CG31622
See related
AllianceGenome:FB:FBgn0264556
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
39D.2; 39D.2a; 39D.2b; 39D.2c; 39D.2d; 39D2a; 39D2b; 39D2c; 39D2d; CG31622; Dmel\CG31622; gene Y; GR39a; Gr39a.a; Gr39a.b; Gr39a.c; Gr39a.d; Gr39aA; Gr39aB; Gr39aC; Gr39aD; GR39D.2; Gr39D2a; Gr39D2A; Gr39D2b; Gr39D2c; Gr39D2d; l(2)k05106
Summary
Predicted to enable ligand-gated monoatomic ion channel activity. Involved in male courtship behavior. Predicted to be located in membrane. Predicted to be active in several cellular components, including axon; dendrite; and neuronal cell body. Is expressed in adult abdominal multidendritic neurons; adult labellum sensillum; gustatory receptor neurons; larval gnathal ganglion; and tarsal segment. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See Gr39a in Genome Data Viewer
Location:
39C1-39C1; 2-54 cM
Exon count:
7
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (21290734..21297686)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (21290734..21297686)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene mir-4974 stem loop Neighboring gene uncharacterized protein Neighboring gene pseudo Neighboring gene mondo Neighboring gene long non-coding RNA:CR44785 Neighboring gene cryptocephal Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

General gene information

mobile_element

  • Loc: 21295523-21295735 mobile_element_type = transposon:INE-1{}4057

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables ligand-gated monoatomic ion channel activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables taste receptor activity NAS
Non-traceable Author Statement
more info
PubMed 
Process Evidence Code Pubs
involved_in chemosensory behavior IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in male courtship behavior IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in male courtship behavior IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in monoatomic ion transmembrane transport ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in sensory perception of taste IEA
Inferred from Electronic Annotation
more info
 
involved_in sensory perception of taste NAS
Non-traceable Author Statement
more info
PubMed 
Component Evidence Code Pubs
is_active_in axon IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in dendrite IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane NAS
Non-traceable Author Statement
more info
PubMed 
is_active_in neuronal cell body IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
gustatory receptor 39a
Names
CG31622-PA
CG31622-PB
CG31622-PC
CG31622-PD
Gr39a-PA
Gr39a-PB
Gr39a-PC
Gr39a-PD
gustatory receptor 39D.2
lethal (2) k05106

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    21290734..21297686
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_165370.1NP_724329.1  gustatory receptor 39a, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_724329.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P58956
    Related
    FBpp0081036, FBtr0081508
    Conserved Domains (1) summary
    pfam08395
    Location:8363
    7tm_7; 7tm Chemosensory receptor
  2. NM_165371.1NP_724330.1  gustatory receptor 39a, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_724330.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P58957
    Related
    FBpp0081037, FBtr0081509
    Conserved Domains (1) summary
    pfam08395
    Location:8372
    7tm_7; 7tm Chemosensory receptor
  3. NM_165372.1NP_724331.1  gustatory receptor 39a, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_724331.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P58958
    Related
    FBpp0081038, FBtr0081510
    Conserved Domains (1) summary
    pfam08395
    Location:9372
    7tm_7; 7tm Chemosensory receptor
  4. NM_165373.1NP_724332.1  gustatory receptor 39a, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_724332.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P58959
    Related
    FBpp0081039, FBtr0081511
    Conserved Domains (1) summary
    pfam08395
    Location:8362
    7tm_7; 7tm Chemosensory receptor