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LOC118063590 probable LRR receptor-like serine/threonine-protein kinase At1g53430 [ Populus alba (white poplar) ]

Gene ID: 118063590, updated on 22-Oct-2023

Summary

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Gene symbol
LOC118063590
Gene description
probable LRR receptor-like serine/threonine-protein kinase At1g53430
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus alba
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC118063590 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
100 current ASM523922v1 (GCF_005239225.1) Unplaced Scaffold NW_023271845.1 (1346463..1356416)

NW_023271845.1Genomic Context describing neighboring genes Neighboring gene probable LRR receptor-like serine/threonine-protein kinase At1g53430 Neighboring gene probable LRR receptor-like serine/threonine-protein kinase At1g53430 Neighboring gene uncharacterized LOC118063593 Neighboring gene small nucleolar RNA R71

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023271845 Unplaced Scaffold Reference ASM523922v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable LRR receptor-like serine/threonine-protein kinase At1g53430

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus alba Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM523922v1 Primary Assembly

Genomic

  1. NW_023271845.1 Reference ASM523922v1 Primary Assembly

    Range
    1346463..1356416
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035077665.1 → XP_034933556.1  probable LRR receptor-like serine/threonine-protein kinase At1g53430

    UniProtKB/TrEMBL
    A0A4U5Q1W1
    Conserved Domains (3) summary
    PLN00113
    Location:9 → 946
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    cd14066
    Location:680 → 944
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    sd00033
    Location:120 → 143
    LRR_RI; leucine-rich repeat [structural motif]
Nucleotide Protein
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