U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PYGB glycogen phosphorylase B [ Zootoca vivipara (common lizard) ]

Gene ID: 118083041, updated on 20-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
PYGB
Gene description
glycogen phosphorylase B
See related
EnsemblRapid:ENSZVIG00000004510
Gene type
protein coding
RefSeq status
MODEL
Organism
Zootoca vivipara
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Zootoca
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PYGB in Genome Data Viewer
Location:
chromosome: 3
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_10 current rZooViv1.1 (GCF_963506605.1) 3 NC_083278.1 (105212529..105252974, complement)
100 previous assembly UG_Zviv_1 (GCF_011800845.1) Linkage Group LG3 NC_048607.1 (13549750..13587925, complement)

Chromosome 3 - NC_083278.1Genomic Context describing neighboring genes Neighboring gene GINS complex subunit 1 Neighboring gene abhydrolase domain containing 12, lysophospholipase Neighboring gene ectonucleoside triphosphate diphosphohydrolase 6 Neighboring gene visual system homeobox 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycogen phosphorylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
glycogen phosphorylase, brain form

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_963506605.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rZooViv1.1

Genomic

  1. NC_083278.1 Reference rZooViv1.1

    Range
    105212529..105252974 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035111055.2 → XP_034966946.1  glycogen phosphorylase, brain form

    Related
    ENSZVIP00000005965.1
    Conserved Domains (1) summary
    cd04300
    Location:98 → 897
    GT35_Glycogen_Phosphorylase; glycogen phosphorylase and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.