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C2CD5 C2 calcium dependent domain containing 5 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 118144188, updated on 10-Oct-2024

Summary

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Gene symbol
C2CD5
Gene description
C2 calcium dependent domain containing 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See C2CD5 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
31
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 9 NC_071450.1 (45196921..45290686)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 9 NC_048391.1 (46340546..46434300)

Chromosome 9 - NC_071450.1Genomic Context describing neighboring genes Neighboring gene small integral membrane protein 30-like Neighboring gene leucine-rich repeat-containing protein 34-like Neighboring gene ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 Neighboring gene U1 spliceosomal RNA Neighboring gene uncharacterized LOC118144193 Neighboring gene cytidine monophosphate N-acetylneuraminic acid synthetase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of D-glucose transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein targeting to membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C2 domain-containing protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071450.1 Reference mCalJa1.2.pat.X

    Range
    45196921..45290686
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035256080.2 → XP_035111971.1  C2 domain-containing protein 5 isoform X10

    UniProtKB/TrEMBL
    A0A2R8P1T9
    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  2. XM_035256088.2 → XP_035111979.1  C2 domain-containing protein 5 isoform X20

    UniProtKB/TrEMBL
    A0A5F4WB87
    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  3. XM_035256085.2 → XP_035111976.1  C2 domain-containing protein 5 isoform X15

    UniProtKB/TrEMBL
    A0A2R8P1T9
    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  4. XM_035256091.2 → XP_035111982.1  C2 domain-containing protein 5 isoform X23

    UniProtKB/TrEMBL
    A0A5F4WB87
    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  5. XM_035256082.2 → XP_035111973.1  C2 domain-containing protein 5 isoform X12

    UniProtKB/TrEMBL
    A0A2R8P1T9
    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  6. XM_035256084.2 → XP_035111975.1  C2 domain-containing protein 5 isoform X14

    UniProtKB/TrEMBL
    A0A2R8P1T9
    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  7. XM_054238281.1 → XP_054094256.1  C2 domain-containing protein 5 isoform X22

  8. XM_035256087.2 → XP_035111978.1  C2 domain-containing protein 5 isoform X17

    UniProtKB/TrEMBL
    A0A2R8P1T9
    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  9. XM_054238280.1 → XP_054094255.1  C2 domain-containing protein 5 isoform X19

  10. XM_035256093.1 → XP_035111984.1  C2 domain-containing protein 5 isoform X25

    UniProtKB/TrEMBL
    A0A5F4WB87
    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  11. XM_035256071.1 → XP_035111962.1  C2 domain-containing protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A5F4VT06
    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  12. XM_035256072.1 → XP_035111963.1  C2 domain-containing protein 5 isoform X2

    UniProtKB/TrEMBL
    A0A2R8N8N5
    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  13. XM_035256076.1 → XP_035111967.1  C2 domain-containing protein 5 isoform X6

    UniProtKB/TrEMBL
    A0A2R8N8N5
    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  14. XM_035256077.1 → XP_035111968.1  C2 domain-containing protein 5 isoform X7

    UniProtKB/TrEMBL
    A0A2R8N8N5
    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  15. XM_054238278.1 → XP_054094253.1  C2 domain-containing protein 5 isoform X8

  16. XM_035256074.1 → XP_035111965.1  C2 domain-containing protein 5 isoform X4

    UniProtKB/TrEMBL
    A0A5F4VT06
    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  17. XM_035256073.1 → XP_035111964.1  C2 domain-containing protein 5 isoform X3

    UniProtKB/TrEMBL
    A0A5F4VT06
    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  18. XM_035256075.1 → XP_035111966.1  C2 domain-containing protein 5 isoform X5

    UniProtKB/TrEMBL
    A0A5F4VT06
    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  19. XM_035256079.2 → XP_035111970.1  C2 domain-containing protein 5 isoform X9

    UniProtKB/TrEMBL
    A0A2R8MR17
    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  20. XM_035256083.2 → XP_035111974.1  C2 domain-containing protein 5 isoform X13

    UniProtKB/TrEMBL
    A0A2R8MR17
    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  21. XM_035256081.1 → XP_035111972.1  C2 domain-containing protein 5 isoform X11

    UniProtKB/TrEMBL
    A0A2R8P0H5
    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  22. XM_035256086.2 → XP_035111977.1  C2 domain-containing protein 5 isoform X16

    UniProtKB/TrEMBL
    A0A2R8P0H5
    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  23. XM_054238279.1 → XP_054094254.1  C2 domain-containing protein 5 isoform X18

  24. XM_035256090.2 → XP_035111981.1  C2 domain-containing protein 5 isoform X21

    UniProtKB/TrEMBL
    A0A2R8P0H5
    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  25. XM_035256092.2 → XP_035111983.1  C2 domain-containing protein 5 isoform X24

    UniProtKB/TrEMBL
    A0A2R8MR17, U3FL61
    Conserved Domains (1) summary
    cd08688
    Location:5 → 114
    C2_KIAA0528-like; C2 domain found in the Human KIAA0528 cDNA clone

  26. XM_054238277.1 → XP_054094252.1  C2 domain-containing protein 5 isoform X1

  27. XM_035256094.2 → XP_035111985.1  C2 domain-containing protein 5 isoform X26

  28. XM_054238282.1 → XP_054094257.1  C2 domain-containing protein 5 isoform X27

  29. XM_054238283.1 → XP_054094258.1  C2 domain-containing protein 5 isoform X28

Nucleotide Protein
Heading Accession and Version

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