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fecA TonB-dependent Fe(3+) dicitrate receptor FecA [ Pseudomonas syringae pv. tomato str. DC3000 ]

Gene ID: 1182843, updated on 3-Dec-2024

Summary

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Gene symbol
fecA
Gene description
TonB-dependent Fe(3+) dicitrate receptor FecA
Locus tag
PSPTO_RS06370
Gene type
protein coding
Organism
Pseudomonas syringae pv. tomato str. DC3000 (strain: DC3000, pathovar: tomato, type-material: reference strain of Pseudomonas syringae group genomosp. 3)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
Old locus tag
PSPTO1207; PSPTO_1207
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Genomic context

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Sequence:
NC_004578.1 (1321452..1323800, complement)

NC_004578.1Genomic Context describing neighboring genes Neighboring gene HPF/RaiA family ribosome-associated protein Neighboring gene TonB-dependent siderophore receptor Neighboring gene FecR domain-containing protein Neighboring gene sigma-70 family RNA polymerase sigma factor Neighboring gene DUF3649 domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004578.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Citrate-mediated iron uptake in Pseudomonas aeruginosa: involvement of the citrate-inducible FecA receptor and the FeoB ferrous iron transporter. Marshall B, et al. Microbiology (Reading), 2009 Jan. PMID 19118371
  2. Signal transfer through three compartments: transcription initiation of the Escherichia coli ferric citrate transport system from the cell surface. Härle C, et al. EMBO J, 1995 Apr 3. PMID 7729419, Free PMC Article
  3. The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000. Buell CR, et al. Proc Natl Acad Sci U S A, 2003 Sep 2. PMID 12928499, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
TonB-dependent Fe(3+) dicitrate receptor FecA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004578.1 Reference assembly

    Range
    1321452..1323800 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_011103468.1 TonB-dependent Fe(3+) dicitrate receptor FecA [Pseudomonas syringae group genomosp. 3]

    See identical proteins and their annotated locations for WP_011103468.1

    UniProtKB/TrEMBL
    A0A0P9VQN2, A0A3M4KT16, Q887S9
    Conserved Domains (3) summary
    smart00965
    Location:62 → 113
    STN; Secretin and TonB N terminus short domain
    COG4772
    Location:109 → 782
    FecA; Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]
    cd01347
    Location:148 → 782
    ligand_gated_channel; TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. ...
Nucleotide Protein
Heading Accession and Version

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