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LOC118325046 taste receptor type 1 member 1-like [ Morone saxatilis (striped sea-bass) ]

Gene ID: 118325046, updated on 22-Oct-2023

Summary

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Gene symbol
LOC118325046
Gene description
taste receptor type 1 member 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Morone saxatilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Moronidae; Morone
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Genomic context

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See LOC118325046 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current NCSU_SB_2.0 (GCF_004916995.1) Unplaced Scaffold NW_023339707.1 (9361250..9368418)

NW_023339707.1Genomic Context describing neighboring genes Neighboring gene hairy-related 3 Neighboring gene taste receptor type 1 member 2-like Neighboring gene taste receptor type 1 member 1-like Neighboring gene taste receptor type 1 member 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023339707 Unplaced Scaffold Reference NCSU_SB_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: taste receptor type 1 member 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Morone saxatilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NCSU_SB_2.0 Primary Assembly

Genomic

  1. NW_023339707.1 Reference NCSU_SB_2.0 Primary Assembly

    Range
    9361250..9368418
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035657609.1 → XP_035513502.1  LOW QUALITY PROTEIN: taste receptor type 1 member 1-like

    Conserved Domains (3) summary
    cd14964
    Location:567 → 589
    7tm_GPCRs; TM helix 2 [structural motif]
    cl10011
    Location:28 → 477
    Periplasmic_Binding_Protein_type1; Type 1 periplasmic binding fold superfamily
    cl28897
    Location:554 → 600
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
Nucleotide Protein
Heading Accession and Version

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