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LOC118325052 synaptonemal complex protein 2-like [ Morone saxatilis (striped sea-bass) ]

Gene ID: 118325052, updated on 22-May-2021

Summary

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Gene symbol
LOC118325052
Gene description
synaptonemal complex protein 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Morone saxatilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Moronidae; Morone
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Genomic context

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See LOC118325052 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
47
Annotation release Status Assembly Chr Location
100 current NCSU_SB_2.0 (GCF_004916995.1) Unplaced Scaffold NW_023339707.1 (10234246..10253188, complement)

NW_023339707.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol glycan anchor biosynthesis, class T Neighboring gene phosphatase and actin regulator 3a Neighboring gene protein phosphatase 1, regulatory subunit 3Da Neighboring gene family with sequence similarity 217 member B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023339707 Unplaced Scaffold Reference NCSU_SB_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome annotation and marker discovery in white bass (Morone chrysops) and striped bass (Morone saxatilis). Li C, et al. Anim Genet, 2014 Dec. PMID 25160849

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
synaptonemal complex protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Morone saxatilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NCSU_SB_2.0 Primary Assembly

Genomic

  1. NW_023339707.1 Reference NCSU_SB_2.0 Primary Assembly

    Range
    10234246..10253188 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035657615.1 → XP_035513508.1  synaptonemal complex protein 2-like

    Conserved Domains (4) summary
    PTZ00449
    Location:928 → 1145
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    pfam05109
    Location:1190 → 1305
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam18581
    Location:9 → 184
    SYCP2_ARLD; Synaptonemal complex 2 armadillo-repeat-like domain
    pfam18584
    Location:281 → 395
    SYCP2_SLD; Synaptonemal complex 2 Spt16M-like domain
Nucleotide Protein
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