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LOC118422717 uncharacterized LOC118422717 [ Branchiostoma floridae (Florida lancelet) ]

Gene ID: 118422717, updated on 14-Dec-2023

Summary

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Gene symbol
LOC118422717
Gene description
uncharacterized LOC118422717
Gene type
protein coding
RefSeq status
MODEL
Organism
Branchiostoma floridae
Lineage
Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes; Branchiostomatidae; Branchiostoma
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Genomic context

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See LOC118422717 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Bfl_VNyyK (GCF_000003815.2) 9 NC_049987.1 (7151017..7161942)

Chromosome 9 - NC_049987.1Genomic Context describing neighboring genes Neighboring gene hemicentin-2-like Neighboring gene DNA mismatch repair protein Msh2-like Neighboring gene protein SON-like Neighboring gene protein DGCR6-like Neighboring gene importin subunit alpha-1-like Neighboring gene lysophosphatidic acid receptor 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_049987.1 Chromosome 9 Reference Bfl_VNyyK Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables netrin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in netrin-activated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC118422717

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Branchiostoma floridae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bfl_VNyyK Primary Assembly

Genomic

  1. NC_049987.1 Reference Bfl_VNyyK Primary Assembly

    Range
    7151017..7161942
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035830435.1 → XP_035686328.1  uncharacterized protein LOC118422717

    UniProtKB/TrEMBL
    A0A9J7LPW8, C3XTK0
    Conserved Domains (2) summary
    PHA03247
    Location:726 → 887
    PHA03247; large tegument protein UL36; Provisional
    cl02517
    Location:342 → 411
    ZU5; ZU5 domain
Nucleotide Protein Strain
Heading Accession and Version

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