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PSPTO_RS22470 PilZ domain-containing protein [ Pseudomonas syringae pv. tomato str. DC3000 ]

Gene ID: 1186016, updated on 3-Dec-2024

Summary

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Gene symbol
PSPTO_RS22470
Gene description
PilZ domain-containing protein
Locus tag
PSPTO_RS22470
Gene type
protein coding
Organism
Pseudomonas syringae pv. tomato str. DC3000 (strain: DC3000, pathovar: tomato, type-material: reference strain of Pseudomonas syringae group genomosp. 3)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
Old locus tag
PSPTO4335; PSPTO_4335
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Genomic context

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Sequence:
NC_004578.1 (4886033..4886392, complement)

NC_004578.1Genomic Context describing neighboring genes Neighboring gene ATP-binding protein Neighboring gene MoxR family ATPase Neighboring gene DUF58 domain-containing protein Neighboring gene tol-pal system YbgF family protein Neighboring gene pyruvate kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004578.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of a novel gene, pilZ, essential for type 4 fimbrial biogenesis in Pseudomonas aeruginosa. Alm RA, et al. J Bacteriol, 1996 Jan. PMID 8550441, Free PMC Article
  2. The structural basis of cyclic diguanylate signal transduction by PilZ domains. Benach J, et al. EMBO J, 2007 Dec 12. PMID 18034161, Free PMC Article
  3. PilZ domain is part of the bacterial c-di-GMP binding protein. Amikam D, et al. Bioinformatics, 2006 Jan 1. PMID 16249258
  4. The c-di-GMP binding protein YcgR controls flagellar motor direction and speed to affect chemotaxis by a "backstop brake" mechanism. Paul K, et al. Mol Cell, 2010 Apr 9. PMID 20346719, Free PMC Article
  5. The PilZ domain is a receptor for the second messenger c-di-GMP: the PilZ domain protein YcgR controls motility in enterobacteria. Ryjenkov DA, et al. J Biol Chem, 2006 Oct 13. PMID 16920715

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
PilZ domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004578.1 Reference assembly

    Range
    4886033..4886392 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_005768657.1 MULTISPECIES: PilZ domain-containing protein [Pseudomonas]

    See identical proteins and their annotated locations for WP_005768657.1

    UniProtKB/TrEMBL
    A0A0N1JDU4, A0A0P9ZU96, A0A3M3LX05, A0A3M3ZIJ5, A0AAP6J6X1, A0AAW4DXY4, Q87X53
    Conserved Domains (1) summary
    cl01260
    Location:31 → 108
    PilZ; PilZ domain
Nucleotide Protein
Heading Accession and Version

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