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xopAG XopAG/AvrGf1 family type III secretion system effector [ Pseudomonas syringae pv. tomato str. DC3000 ]

Gene ID: 1186410, updated on 4-Feb-2024

Summary

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Gene symbol
xopAG
Gene description
XopAG/AvrGf1 family type III secretion system effector
Locus tag
PSPTO_RS24435
Gene type
protein coding
Organism
Pseudomonas syringae pv. tomato str. DC3000 (strain: DC3000, pathovar: tomato, type-material: reference strain of Pseudomonas syringae group genomosp. 3)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
Old locus tag
PSPTO4727; PSPTO_4727
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Genomic context

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Sequence:
NC_004578.1 (5353685..5355166, complement)

NC_004578.1Genomic Context describing neighboring genes Neighboring gene IS5 family transposase Neighboring gene XopB/HopD1 family type III secretion system effector Neighboring gene pseudo Neighboring gene IS21-like element ISPsy4 family helper ATPase IstB Neighboring gene IS21-like element ISPsy4 family transposase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004578.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Pseudomonas syringae Type III Effector HopG1 Induces Actin Remodeling to Promote Symptom Development and Susceptibility during Infection. Shimono M, et al. Plant Physiol, 2016 Jul. PMID 27217495, Free PMC Article
  2. The Pseudomonas syringae type III effector HopG1 targets mitochondria, alters plant development and suppresses plant innate immunity. Block A, et al. Cell Microbiol, 2010 Mar. PMID 19863557, Free PMC Article
  3. Molecular characterization of XopAG effector AvrGf2 from Xanthomonas fuscans ssp. aurantifolii in grapefruit. Gochez AM, et al. Mol Plant Pathol, 2017 Apr. PMID 27030294, Free PMC Article
  4. The type III effectors of Xanthomonas. White FF, et al. Mol Plant Pathol, 2009 Nov. PMID 19849782, Free PMC Article
  5. The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000. Buell CR, et al. Proc Natl Acad Sci U S A, 2003 Sep 2. PMID 12928499, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. HopG1 induces changes in the organization of the actin cytoskeleton as part of its virulence function in promoting disease symptom development.
    Title: The Pseudomonas syringae Type III Effector HopG1 Induces Actin Remodeling to Promote Symptom Development and Susceptibility during Infection.
  2. These findings suggest that HopG1's target is mitochondrial and that effector/target interaction promotes plant disease by disrupting mitochondrial functions.
    Title: The Pseudomonas syringae type III effector HopG1 targets mitochondria, alters plant development and suppresses plant innate immunity.
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General gene information

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Homology

General protein information

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Preferred Names
XopAG/AvrGf1 family type III secretion system effector

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004578.1 Reference assembly

    Range
    5353685..5355166 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_011105137.1 XopAG/AvrGf1 family type III secretion system effector [Pseudomonas syringae group genomosp. 3]

    See identical proteins and their annotated locations for WP_011105137.1

    UniProtKB/TrEMBL
    A0A3M2ZM82, G3XCJ2, Q79LW6, Q87W42
Nucleotide Protein
Heading Accession and Version

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