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VP_RS10115 ABC transporter substrate-binding protein [ Vibrio parahaemolyticus RIMD 2210633 ]

Gene ID: 1189591, updated on 6-Oct-2023

Summary

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Gene symbol
VP_RS10115
Gene description
ABC transporter substrate-binding protein
Locus tag
VP_RS10115
Gene type
protein coding
Organism
Vibrio parahaemolyticus RIMD 2210633 (strain: RIMD 2210633, substrain: RIMD 2210633)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
Old locus tag
VP2080
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Genomic context

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Location:
chromosome: 1
Sequence:
Chromosome: 1; NC_004603.1 (2186322..2187287, complement)

Chromosome 1 - NC_004603.1Genomic Context describing neighboring genes Neighboring gene maltodextrin glucosidase Neighboring gene ABC transporter ATP-binding protein Neighboring gene ABC transporter permease Neighboring gene terminus macrodomain insulation protein YfbV Neighboring gene acetate kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004603.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Uptake or extrusion: crystal structures of full ABC transporters suggest a common mechanism. Dawson RJ, et al. Mol Microbiol, 2007 Jul. PMID 17578454
  2. A filamentous phage associated with recent pandemic Vibrio parahaemolyticus O3:K6 strains. Nasu H, et al. J Clin Microbiol, 2000 Jun. PMID 10834969, Free PMC Article
  3. Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism distinct from that of V cholerae. Makino K, et al. Lancet, 2003 Mar 1. PMID 12620739
  4. Structural, functional, and evolutionary relationships among extracellular solute-binding receptors of bacteria. Tam R, et al. Microbiol Rev, 1993 Jun. PMID 8336670, Free PMC Article
  5. The substrate-binding protein in bacterial ABC transporters: dissecting roles in the evolution of substrate specificity. Maqbool A, et al. Biochem Soc Trans, 2015 Oct. PMID 26517916

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
ABC transporter substrate-binding protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004603.1 Reference assembly

    Range
    2186322..2187287 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_005461481.1 MULTISPECIES: ABC transporter substrate-binding protein [Vibrio]

    See identical proteins and their annotated locations for WP_005461481.1

    UniProtKB/TrEMBL
    A0A072GA81, Q87MZ6
    Conserved Domains (1) summary
    COG2984
    Location:5 → 319
    COG2984; ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Nucleotide Protein
Heading Accession and Version

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