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LOC119193858 UPF0587 protein GA18326-like [ Manduca sexta (tobacco hornworm) ]

Gene ID: 119193858, updated on 14-Dec-2023

Summary

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Gene symbol
LOC119193858
Gene description
UPF0587 protein GA18326-like
Locus tag
O3G_MSEX009647
See related
EnsemblRapid:ENSMSXG00000004982
Gene type
protein coding
RefSeq status
MODEL
Organism
Manduca sexta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Sphingidae; Sphinginae; Sphingini; Manduca
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Genomic context

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See LOC119193858 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
3
Annotation release Status Assembly Chr Location
102 current JHU_Msex_v1.0 (GCF_014839805.1) 7 NC_051121.1 (1483488..1485112)

Chromosome 7 - NC_051121.1Genomic Context describing neighboring genes Neighboring gene bystin-like Neighboring gene uncharacterized LOC119193857 Neighboring gene titin-like Neighboring gene yemanuclein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051121.1 Chromosome 7 Reference JHU_Msex_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Integrated modeling of protein-coding genes in the Manduca sexta genome using RNA-Seq data from the biochemical model insect. Cao X, et al. Insect Biochem Mol Biol, 2015 Jul. PMID 25612938, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UPF0587 protein GA18326-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manduca sexta Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference JHU_Msex_v1.0 Primary Assembly

Genomic

  1. NC_051121.1 Reference JHU_Msex_v1.0 Primary Assembly

    Range
    1483488..1485112
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037447720.1 → XP_037303617.1  UPF0587 protein GA18326-like

    UniProtKB/TrEMBL
    A0A921ZFV0
    Related
    ENSMSXP00000007309.1, ENSMSXT00000008411.1
    Conserved Domains (1) summary
    pfam05907
    Location:10 → 158
    DUF866; Eukaryotic protein of unknown function (DUF866)
Nucleotide Protein
Heading Accession and Version

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