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PKDCC protein kinase domain containing, cytoplasmic [ Choloepus didactylus (southern two-toed sloth) ]

Gene ID: 119512611, updated on 21-Mar-2024

Summary

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Gene symbol
PKDCC
Gene description
protein kinase domain containing, cytoplasmic
See related
EnsemblRapid:ENSCDIG00005009585
Gene type
protein coding
RefSeq status
MODEL
Organism
Choloepus didactylus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Xenarthra; Pilosa; Folivora; Megalonychidae; Choloepus
Orthologs
human mouse all
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Genomic context

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See PKDCC in Genome Data Viewer
Location:
chromosome: 17
Exon count:
7
Annotation release Status Assembly Chr Location
100 current mChoDid1.pri (GCF_015220235.1) 17 NC_051323.1 (50124707..50134620, complement)

Chromosome 17 - NC_051323.1Genomic Context describing neighboring genes Neighboring gene translation initiation factor IF-2-like Neighboring gene U6atac minor spliceosomal RNA Neighboring gene TSSK6-activating co-chaperone protein-like Neighboring gene vegetative cell wall protein gp1 Neighboring gene uncharacterized LOC119512716

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051323.1 Chromosome 17 Reference mChoDid1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables non-membrane spanning protein tyrosine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
extracellular tyrosine-protein kinase PKDCC

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Choloepus didactylus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mChoDid1.pri Primary Assembly

Genomic

  1. NC_051323.1 Reference mChoDid1.pri Primary Assembly

    Range
    50124707..50134620 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037807385.1 → XP_037663313.1  extracellular tyrosine-protein kinase PKDCC isoform X1

    Related
    ENSCDIP00005013405.1, ENSCDIT00005015246.1
    Conserved Domains (1) summary
    cl21453
    Location:200 → 370
    PKc_like; Protein Kinases, catalytic domain

  2. XM_037807387.1 → XP_037663315.1  extracellular tyrosine-protein kinase PKDCC isoform X3

    Conserved Domains (1) summary
    cl21453
    Location:162 → 332
    PKc_like; Protein Kinases, catalytic domain

  3. XM_037807386.1 → XP_037663314.1  extracellular tyrosine-protein kinase PKDCC isoform X2

    Conserved Domains (1) summary
    cl21453
    Location:166 → 336
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version

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