U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC119979768 zinc finger protein Pegasus-like [ Scyliorhinus canicula (smaller spotted catshark) ]

Gene ID: 119979768, updated on 7-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC119979768
Gene description
zinc finger protein Pegasus-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Scyliorhinus canicula
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Carcharhiniformes; Scyliorhinidae; Scyliorhinus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC119979768 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
8
Annotation release Status Assembly Chr Location
100 current sScyCan1.1 (GCF_902713615.1) 16 NC_052161.1 (34107574..34162040, complement)

Chromosome 16 - NC_052161.1Genomic Context describing neighboring genes Neighboring gene ADAM metallopeptidase domain 9b Neighboring gene L-seryl-tRNA(Sec) kinase Neighboring gene zinc finger protein Pegasus-like Neighboring gene acyl-CoA dehydrogenase short/branched chain

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_052161.1 Chromosome 16 Reference sScyCan1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: zinc finger protein Pegasus-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Scyliorhinus canicula Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sScyCan1.1 Primary Assembly

Genomic

  1. NC_052161.1 Reference sScyCan1.1 Primary Assembly

    Range
    34107574..34162040 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038822400.1 → XP_038678328.1  LOW QUALITY PROTEIN: zinc finger protein Pegasus-like

    Conserved Domains (2) summary
    sd00017
    Location:83 → 103
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:123 → 147
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases