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LOC120017325 BTB/POZ and MATH domain-containing protein 4-like [ Tripterygium wilfordii ]

Gene ID: 120017325, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120017325
Gene description
BTB/POZ and MATH domain-containing protein 4-like
Locus tag
HS088_TW15G00668
Gene type
protein coding
RefSeq status
MODEL
Organism
Tripterygium wilfordii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Celastrales; Celastraceae; Tripterygium
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Genomic context

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See LOC120017325 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM1340144v1 (GCF_013401445.1) 15 NC_052246.1 (4388041..4393369)

Chromosome 15 - NC_052246.1Genomic Context describing neighboring genes Neighboring gene protein VAPYRIN-like Neighboring gene benzyl alcohol O-benzoyltransferase-like Neighboring gene uncharacterized LOC120016920 Neighboring gene co-chaperone protein p23-2-like Neighboring gene uncharacterized LOC120016152

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052246.1 Chromosome 15 Reference ASM1340144v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BTB/POZ and MATH domain-containing protein 4-like
Names
BTB-POZ and MATH domain 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tripterygium wilfordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1340144v1

Genomic

  1. NC_052246.1 Reference ASM1340144v1

    Range
    4388041..4393369
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038870501.1 → XP_038726429.1  BTB/POZ and MATH domain-containing protein 4-like

    UniProtKB/TrEMBL
    A0A7J7CMB6
    Conserved Domains (3) summary
    cd00121
    Location:65 → 198
    MATH; MATH (meprin and TRAF-C homology) domain; an independent folding unit with an eight-stranded beta-sandwich structure found in meprins, TRAFs and other proteins. Meprins comprise a class of extracellular metalloproteases which are anchored to the membrane ...
    cd18280
    Location:220 → 342
    BTB_POZ_BPM_plant; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in plant BTB/POZ-MATH (BPM) protein family
    cd14736
    Location:342 → 402
    BACK_AtBPM-like; BACK (BTB and C-terminal Kelch) domain found in plant BTB/POZ-MATH (BPM) protein family
Nucleotide Protein
Heading Accession and Version

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