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LOC120093238 60S ribosomal protein L35-like [ Rattus norvegicus (Norway rat) ]

Gene ID: 120093238, updated on 14-Nov-2024

Summary

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Symbol
LOC120093238provided by RGD
Full Name
60S ribosomal protein L35-likeprovided by RGD
Primary source
RGD:40979901
See related
EnsemblRapid:ENSRNOG00000032523 AllianceGenome:RGD:40979901
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
AABR07063704.1
Summary
Predicted to be a structural constituent of ribosome. Predicted to be involved in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) and translation. Predicted to be part of cytosolic large ribosomal subunit. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See LOC120093238 in Genome Data Viewer
Location:
6q16
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 6 NC_086024.1 (46152341..46153099)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 6 NC_051341.1 (40423594..40425165)

Chromosome 6 - NC_086024.1Genomic Context describing neighboring genes Neighboring gene transfer RNA valine (anticodon AAC) 13 Neighboring gene prothymosin alpha, pseudogene 3 Neighboring gene hippocalcin-like 1 Neighboring gene uncharacterized LOC134479348

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables mRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
  
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
large ribosomal subunit protein uL29-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086024.1 Reference GRCr8

    Range
    46152341..46153099
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039078184.2 → XP_038934112.1  large ribosomal subunit protein uL29-like

    UniProtKB/TrEMBL
    A0A8L2UJE8, D3ZB50
    Related
    ENSRNOP00000048311.2, ENSRNOT00000041376.5
    Conserved Domains (1) summary
    pfam00831
    Location:8 → 63
    Ribosomal_L29; Ribosomal L29 protein
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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