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LOC120101643 sodium/nucleoside cotransporter 2-like [ Rattus norvegicus (Norway rat) ]

Gene ID: 120101643, updated on 9-Dec-2024

Summary

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Symbol
LOC120101643provided by RGD
Full Name
sodium/nucleoside cotransporter 2-likeprovided by RGD
Primary source
RGD:41113166
See related
EnsemblRapid:ENSRNOG00000066870 AllianceGenome:RGD:41113166
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable nucleoside transmembrane transporter activity. Predicted to be involved in nucleoside transmembrane transport. Predicted to be located in plasma membrane. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See LOC120101643 in Genome Data Viewer
Location:
3q35
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (129959228..129988756)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (109505640..109535183)

Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene transfer RNA histidine (anticodon GUG) 9 Neighboring gene solute carrier family 28 member 2 Neighboring gene U4 spliceosomal RNA Neighboring gene sodium/nucleoside cotransporter 2-like Neighboring gene transformer 2 beta, pseudogene 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables nucleoside transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
enables nucleoside:sodium symporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables purine nucleoside transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in nucleoside transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in nucleoside transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
involved_in retina homeostasis IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
sodium/nucleoside cotransporter 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086021.1 Reference GRCr8

    Range
    129959228..129988756
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039106537.2 → XP_038962465.1  sodium/nucleoside cotransporter 2-like

    UniProtKB/TrEMBL
    F1LXN6
    Related
    ENSRNOP00000034564.6, ENSRNOT00000036435.8
    Conserved Domains (1) summary
    TIGR00804
    Location:175 → 586
    nupC; nucleoside transporter

  2. XM_039106538.2 → XP_038962466.1  sodium/nucleoside cotransporter 2-like

    UniProtKB/TrEMBL
    F1LXN6
    Conserved Domains (1) summary
    TIGR00804
    Location:175 → 586
    nupC; nucleoside transporter
Nucleotide Protein Strain
Heading Accession and Version

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