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Bcl10 B cell leukemia/lymphoma 10 [ Mus musculus (house mouse) ]

Gene ID: 12042, updated on 27-Nov-2024

Summary

Official Symbol
Bcl10provided by MGI
Official Full Name
B cell leukemia/lymphoma 10provided by MGI
Primary source
MGI:MGI:1337994
See related
Ensembl:ENSMUSG00000028191 AllianceGenome:MGI:1337994
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
CLAP; ME10; cE10; CIPER; BCL-10; CARMEN
Summary
Enables CARD domain binding activity; identical protein binding activity; and signaling adaptor activity. Involved in several processes, including antifungal innate immune response; non-canonical NF-kappaB signal transduction; and regulation of gene expression. Acts upstream of or within several processes, including cellular defense response; lymphocyte apoptotic process; and regulation of signal transduction. Located in cytosol; immunological synapse; and membrane raft. Part of CBM complex and polkadots. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; sensory organ; and vibrissa follicle. Human ortholog(s) of this gene implicated in extranodal marginal zone lymphoma of mucosa-associated lymphoid tissue; immunodeficiency 37; malignant mesothelioma; and non-Hodgkin lymphoma. Orthologous to human BCL10 (BCL10 immune signaling adaptor). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Ubiquitous expression in large intestine adult (RPKM 10.2), bladder adult (RPKM 8.8) and 28 other tissues See more
Orthologs
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Genomic context

See Bcl10 in Genome Data Viewer
Location:
3 H2; 3 71.03 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (145630017..145640121)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (145924262..145934366)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 17501 Neighboring gene STARR-seq mESC enhancer starr_09202 Neighboring gene STARR-seq mESC enhancer starr_09203 Neighboring gene STARR-seq mESC enhancer starr_09204 Neighboring gene STARR-seq mESC enhancer starr_09205 Neighboring gene dimethylarginine dimethylaminohydrolase 1 Neighboring gene ribosomal protein L36A, pseudogene 2 Neighboring gene predicted gene, 35187 Neighboring gene STARR-positive B cell enhancer mm9_chr3:145568448-145568748 Neighboring gene STARR-positive B cell enhancer ABC_E35 Neighboring gene STARR-positive B cell enhancer ABC_E6142 Neighboring gene RIKEN cDNA 2410004B18 gene Neighboring gene STARR-positive B cell enhancer ABC_E11228 Neighboring gene STARR-positive B cell enhancer ABC_E336 Neighboring gene STARR-positive B cell enhancer ABC_E9228 Neighboring gene VISTA enhancer mm311 Neighboring gene predicted gene, 35352 Neighboring gene synapse defective 1, Rho GTPase, homolog 2 (C. elegans)

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Chemically induced (ENU) (1) 
  • Endonuclease-mediated (2) 
  • Targeted (3)  1 citation

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables CARD domain binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables NF-kappaB binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables NF-kappaB binding ISO
Inferred from Sequence Orthology
more info
 
enables NF-kappaB binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables cysteine-type endopeptidase activator activity involved in apoptotic process ISO
Inferred from Sequence Orthology
more info
PubMed 
enables general transcription initiation factor binding ISO
Inferred from Sequence Orthology
more info
 
enables general transcription initiation factor binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables identical protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
contributes_to kinase activator activity IBA
Inferred from Biological aspect of Ancestor
more info
 
contributes_to kinase activator activity ISO
Inferred from Sequence Orthology
more info
 
contributes_to kinase activator activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables protease binding IEA
Inferred from Electronic Annotation
more info
 
enables protease binding ISO
Inferred from Sequence Orthology
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables protein heterodimerization activity ISO
Inferred from Sequence Orthology
more info
PubMed 
enables protein homodimerization activity ISO
Inferred from Sequence Orthology
more info
PubMed 
enables protein kinase B binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein kinase B binding ISO
Inferred from Sequence Orthology
more info
 
enables protein kinase B binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables protein-containing complex binding IEA
Inferred from Electronic Annotation
more info
 
enables protein-containing complex binding ISO
Inferred from Sequence Orthology
more info
 
enables protein-macromolecule adaptor activity ISO
Inferred from Sequence Orthology
more info
 
enables signaling adaptor activity IDA
Inferred from Direct Assay
more info
PubMed 
enables signaling adaptor activity ISO
Inferred from Sequence Orthology
more info
PubMed 
enables transcription coactivator activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables transcription coactivator activity ISO
Inferred from Sequence Orthology
more info
 
enables transcription coactivator activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables ubiquitin protein ligase binding ISO
Inferred from Sequence Orthology
more info
 
enables ubiquitin protein ligase binding ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within B cell apoptotic process IDA
Inferred from Direct Assay
more info
PubMed 
NOT acts_upstream_of_or_within B cell apoptotic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within T cell apoptotic process IDA
Inferred from Direct Assay
more info
PubMed 
NOT acts_upstream_of_or_within T cell apoptotic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in T cell receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in T cell receptor signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in adaptive immune response IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in adaptive immune response ISO
Inferred from Sequence Orthology
more info
 
involved_in adaptive immune response ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in antifungal innate immune response IDA
Inferred from Direct Assay
more info
PubMed 
involved_in apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within cellular defense response IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in cellular response to lipopolysaccharide ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in cellular response to mechanical stimulus IEA
Inferred from Electronic Annotation
more info
 
NOT acts_upstream_of_or_within fibroblast apoptotic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within immunoglobulin mediated immune response IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in innate immune response ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in lipopolysaccharide-mediated signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in lipopolysaccharide-mediated signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in mast cell activation NAS
Non-traceable Author Statement
more info
PubMed 
involved_in negative regulation of mature B cell apoptotic process ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of mature B cell apoptotic process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in neural tube closure IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in non-canonical NF-kappaB signal transduction IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in non-canonical NF-kappaB signal transduction ISO
Inferred from Sequence Orthology
more info
PubMed 
involved_in positive regulation of DNA-templated transcription ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of DNA-templated transcription ISS
Inferred from Sequence or Structural Similarity
more info
 
NOT acts_upstream_of_or_within positive regulation of JUN kinase activity ISO
Inferred from Sequence Orthology
more info
PubMed 
involved_in positive regulation of NF-kappaB transcription factor activity IDA
Inferred from Direct Assay
more info
PubMed 
NOT acts_upstream_of_or_within positive regulation of NF-kappaB transcription factor activity ISO
Inferred from Sequence Orthology
more info
PubMed 
acts_upstream_of_or_within positive regulation of NF-kappaB transcription factor activity ISO
Inferred from Sequence Orthology
more info
PubMed 
involved_in positive regulation of NF-kappaB transcription factor activity ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of NF-kappaB transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within positive regulation of T cell activation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of T cell receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of T cell receptor signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within positive regulation of apoptotic process ISO
Inferred from Sequence Orthology
more info
PubMed 
involved_in positive regulation of apoptotic process ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of canonical NF-kappaB signal transduction ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of canonical NF-kappaB signal transduction ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within positive regulation of cysteine-type endopeptidase activity IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within positive regulation of cysteine-type endopeptidase activity ISO
Inferred from Sequence Orthology
more info
PubMed 
involved_in positive regulation of cysteine-type endopeptidase activity ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of cytokine production IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within positive regulation of execution phase of apoptosis ISO
Inferred from Sequence Orthology
more info
PubMed 
involved_in positive regulation of extrinsic apoptotic signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within positive regulation of extrinsic apoptotic signaling pathway IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of extrinsic apoptotic signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of extrinsic apoptotic signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of interleukin-8 production ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of interleukin-8 production ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of phosphorylation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of phosphorylation ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of protein ubiquitination ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of protein ubiquitination ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in programmed cell death ISO
Inferred from Sequence Orthology
more info
 
involved_in programmed cell death ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in protein homooligomerization ISO
Inferred from Sequence Orthology
more info
 
involved_in protein homooligomerization ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within regulation of T cell receptor signaling pathway IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in response to food ISO
Inferred from Sequence Orthology
more info
 
involved_in response to food ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within response to fungus IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in response to lipopolysaccharide IDA
Inferred from Direct Assay
more info
PubMed 
NOT acts_upstream_of_or_within thymocyte apoptotic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in toll-like receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in toll-like receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
part_of CBM complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of CBM complex IDA
Inferred from Direct Assay
more info
PubMed 
part_of CBM complex ISO
Inferred from Sequence Orthology
more info
 
part_of CBM complex ISS
Inferred from Sequence or Structural Similarity
more info
 
is_active_in cytoplasm IC
Inferred by Curator
more info
PubMed 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
PubMed 
located_in cytoplasm ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in cytoplasmic microtubule ISO
Inferred from Sequence Orthology
more info
 
located_in cytoplasmic microtubule ISS
Inferred from Sequence or Structural Similarity
more info
 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytosol IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in cytosol ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in cytosol TAS
Traceable Author Statement
more info
 
located_in immunological synapse IDA
Inferred from Direct Assay
more info
PubMed 
located_in lysosome ISO
Inferred from Sequence Orthology
more info
 
located_in lysosome ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in membrane raft IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in perinuclear region of cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in perinuclear region of cytoplasm ISS
Inferred from Sequence or Structural Similarity
more info
 
part_of polkadots IDA
Inferred from Direct Assay
more info
PubMed 
part_of protein-containing complex ISO
Inferred from Sequence Orthology
more info
 
part_of protein-containing complex ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
B-cell lymphoma/leukemia 10
Names
B-cell CLL/lymphoma 10
CARD-containing molecule enhancing NF-kappa-B
CARD-like apoptotic protein
CED-3/ICH-1 prodomain homologous E10-like regulator
cellular homolog of vCARMEN
cellular-E10
mammalian CARD-containing adapter molecule E10

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_009740.2NP_033870.1  B-cell lymphoma/leukemia 10

    See identical proteins and their annotated locations for NP_033870.1

    Status: VALIDATED

    Source sequence(s)
    AC123684, AK140179, AK150883, BU707261
    Consensus CDS
    CCDS17897.1
    UniProtKB/Swiss-Prot
    Q3UBN4, Q9Z0H7
    UniProtKB/TrEMBL
    B7ZWE5, Q3THY9
    Related
    ENSMUSP00000029842.8, ENSMUST00000029842.9
    Conserved Domains (1) summary
    cd08810
    Location:17100
    CARD_BCL10; Caspase activation and recruitment domain of B-cell lymphoma 10

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    145630017..145640121
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)