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Bcl2a1a B cell leukemia/lymphoma 2 related protein A1a [ Mus musculus (house mouse) ]

Gene ID: 12044, updated on 27-Nov-2024

Summary

Official Symbol
Bcl2a1aprovided by MGI
Official Full Name
B cell leukemia/lymphoma 2 related protein A1aprovided by MGI
Primary source
MGI:MGI:102687
See related
Ensembl:ENSMUSG00000102037 AllianceGenome:MGI:102687
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
A1; Bfl-1; Hbpa1; Bcl2a1
Summary
Predicted to enable BH domain binding activity and channel activity. Involved in negative regulation of apoptotic process. Acts upstream of or within B cell homeostasis and negative regulation of B cell apoptotic process. Predicted to be located in cytoplasm. Predicted to be active in mitochondrial outer membrane. Is expressed in several structures, including bone; central nervous system; heart; hemolymphoid system; and respiratory system. Orthologous to human BCL2A1 (BCL2 related protein A1). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in spleen adult (RPKM 7.1), thymus adult (RPKM 4.6) and 13 other tissues See more
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Genomic context

See Bcl2a1a in Genome Data Viewer
Location:
9 E3.1; 9 47.24 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (88838973..88844469)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (88956920..88962416)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene predicted gene 2396 Neighboring gene STARR-seq mESC enhancer starr_24864 Neighboring gene STARR-seq mESC enhancer starr_24865 Neighboring gene predicted gene, 23707 Neighboring gene predicted gene, 53510 Neighboring gene STARR-seq mESC enhancer starr_24866 Neighboring gene predicted gene, 51716 Neighboring gene predicted gene, 24463 Neighboring gene predicted gene, 57540

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 
  • Targeted (4)  1 citation

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables BH domain binding ISO
Inferred from Sequence Orthology
more info
 
enables channel activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein-containing complex binding ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in cytoplasm ISS
Inferred from Sequence or Structural Similarity
more info
 
is_active_in mitochondrial outer membrane IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
bcl-2-related protein A1
Names
A1-A
hemopoietic-specific early response protein
protein BFL-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_009742.3NP_033872.1  bcl-2-related protein A1

    See identical proteins and their annotated locations for NP_033872.1

    Status: VALIDATED

    Source sequence(s)
    CT030259
    Consensus CDS
    CCDS23391.1
    UniProtKB/Swiss-Prot
    Q07440
    UniProtKB/TrEMBL
    Q8K164
    Related
    ENSMUSP00000096086.3, ENSMUST00000098485.4
    Conserved Domains (1) summary
    smart00337
    Location:37140
    BCL; BCL (B-Cell lymphoma); contains BH1, BH2 regions

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    88838973..88844469
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)