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aspa aspartoacylase [ Pimephales promelas (fathead minnow) ]

Gene ID: 120495092, updated on 21-Mar-2024

Summary

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Gene symbol
aspa
Gene description
aspartoacylase
Locus tag
F2P79_016882
Gene type
protein coding
RefSeq status
MODEL
Organism
Pimephales promelas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Leuciscidae; Pogonichthyinae; Pimephales
Orthologs
human zebrafish all
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Genomic context

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See aspa in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current EPA_FHM_2.0 (GCF_016745375.1) Unplaced Scaffold NW_024121455.1 (4445372..4515340)

NW_024121455.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120495101 Neighboring gene uncharacterized LOC120495102 Neighboring gene uncharacterized LOC120494967 Neighboring gene uncharacterized LOC120494966

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024121455 Unplaced Scaffold Reference EPA_FHM_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, acting on ester bonds IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aspartoacylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pimephales promelas Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EPA_FHM_2.0 Primary Assembly

Genomic

  1. NW_024121455.1 Reference EPA_FHM_2.0 Primary Assembly

    Range
    4445372..4515340
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039694499.1 → XP_039550433.1  aspartoacylase isoform X1

    Conserved Domains (1) summary
    cd06909
    Location:14 → 178
    M14_ASPA; Peptidase M14 Aspartoacylase (ASPA) subfamily

  2. XM_039694500.1 → XP_039550434.1  aspartoacylase isoform X2

    Conserved Domains (1) summary
    cd06909
    Location:14 → 178
    M14_ASPA; Peptidase M14 Aspartoacylase (ASPA) subfamily

  3. XM_039694501.1 → XP_039550435.1  aspartoacylase isoform X3

    Conserved Domains (1) summary
    cd06909
    Location:14 → 178
    M14_ASPA; Peptidase M14 Aspartoacylase (ASPA) subfamily
Nucleotide Protein
Heading Accession and Version

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