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LOC120575697 neuferricin [ Perca fluviatilis (European perch) ]

Gene ID: 120575697, updated on 10-Jul-2024

Summary

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Gene symbol
LOC120575697
Gene description
neuferricin
Locus tag
PFLUV_G00195190
See related
EnsemblRapid:ENSPFLG00020007535
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca fluviatilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
Orthologs
human zebrafish all
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Genomic context

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See LOC120575697 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
4
Annotation release Status Assembly Chr Location
100 current GENO_Pfluv_1.0 (GCF_010015445.1) 16 NC_053127.1 (28633009..28636517)

Chromosome 16 - NC_053127.1Genomic Context describing neighboring genes Neighboring gene ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 Neighboring gene zinc finger, ZZ-type with EF hand domain 1 Neighboring gene ankyrin repeat and FYVE domain containing 1 Neighboring gene ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) Neighboring gene SPNS lysolipid transporter 3, sphingosine-1-phosphate (putative)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053127.1 Chromosome 16 Reference GENO_Pfluv_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neuferricin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca fluviatilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GENO_Pfluv_1.0

Genomic

  1. NC_053127.1 Reference GENO_Pfluv_1.0

    Range
    28633009..28636517
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039826524.1 → XP_039682458.1  neuferricin

    UniProtKB/TrEMBL
    A0A6A5EKK5
    Related
    ENSPFLP00020018105.1, ENSPFLT00020020021.1
    Conserved Domains (1) summary
    pfam00173
    Location:42 → 101
    Cyt-b5; Cytochrome b5-like Heme/Steroid binding domain
Nucleotide Protein
Heading Accession and Version

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