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Cdk7 Cyclin-dependent kinase 7 [ Bactrocera tryoni ]

Gene ID: 120775534, updated on 24-May-2024

Summary

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Gene symbol
Cdk7
Gene description
Cyclin-dependent kinase 7
See related
EnsemblRapid:LOC120775534
Gene type
protein coding
RefSeq status
MODEL
Organism
Bactrocera tryoni
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Tephritoidea; Tephritidae; Bactrocera; Bactrocera
Orthologs
fruit fly all
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Genomic context

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See Cdk7 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
2
Annotation release Status Assembly Chr Location
100 current CSIRO_BtryS06_freeze2 (GCF_016617805.1) 4 NC_052502.1 (3468877..3470367, complement)

Chromosome 4 - NC_052502.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120775303 Neighboring gene ATPase phospholipid transporting 8B Neighboring gene small nucleolar RNA psi18S-1854 Neighboring gene small nucleolar RNA psi18S-1854 Neighboring gene ribosomal protein S5a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052502.1 Chromosome 4 Reference CSIRO_BtryS06_freeze2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II CTD heptapeptide repeat kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cyclin-dependent protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription factor TFIIH holo complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription factor TFIIK complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclin-dependent kinase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bactrocera tryoni Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CSIRO_BtryS06_freeze2 Primary Assembly

Genomic

  1. NC_052502.1 Reference CSIRO_BtryS06_freeze2 Primary Assembly

    Range
    3468877..3470367 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040105755.1 → XP_039961689.1  cyclin-dependent kinase 7

    Related
    XP_039961689.1, XM_040105755.1
    Conserved Domains (1) summary
    cd07841
    Location:10 → 307
    STKc_CDK7; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7
Nucleotide Protein
Heading Accession and Version

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