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Trnaa-agc transfer RNA alanine (anticodon AGC) [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 120888895, updated on 24-Mar-2021

Summary

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Gene symbol
Trnaa-agc
Gene description
transfer RNA alanine (anticodon AGC)
Gene type
tRNA
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Summary
This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104).
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Genomic context

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See Trnaa-agc in Genome Data Viewer
Location:
chromosome: Un
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024404945.1 (120287516..120287586, complement)

NW_024404945.1Genomic Context describing neighboring genes Neighboring gene SOSS complex subunit B1-like Neighboring gene high mobility group protein B1-like Neighboring gene zinc finger MYM-type containing 5 Neighboring gene ubiquitin-conjugating enzyme E2 variant 1-like Neighboring gene paraspeckle component 1 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024404945 Unplaced Scaffold Reference HiC_Itri_2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024404945.1 Reference HiC_Itri_2 Primary Assembly

    Range
    120287516..120287586 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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