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RSPRY1 ring finger and SPRY domain containing 1 [ Rana temporaria (common frog) ]

Gene ID: 120917694, updated on 21-Mar-2024

Summary

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Gene symbol
RSPRY1
Gene description
ring finger and SPRY domain containing 1
See related
EnsemblRapid:ENSRTEG00010014799
Gene type
protein coding
RefSeq status
MODEL
Organism
Rana temporaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
Orthologs
human mouse all
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Genomic context

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See RSPRY1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
15
Annotation release Status Assembly Chr Location
100 current aRanTem1.1 (GCF_905171775.1) 11 NC_053499.1 (131056446..131104350)

Chromosome 11 - NC_053499.1Genomic Context describing neighboring genes Neighboring gene carbohydrate sulfotransferase 5-like Neighboring gene proteasome activator subunit 3 interacting protein 1 Neighboring gene small nucleolar RNA SNORA5 Neighboring gene ARF like GTPase 2 binding protein Neighboring gene protein kinase C theta type-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053499.1 Chromosome 11 Reference aRanTem1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis involved in protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RING finger and SPRY domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRanTem1.1

Genomic

  1. NC_053499.1 Reference aRanTem1.1

    Range
    131056446..131104350
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040329162.1 → XP_040185096.1  RING finger and SPRY domain-containing protein 1

    Related
    ENSRTEP00010018982.1, ENSRTET00010025173.1
    Conserved Domains (2) summary
    cd12883
    Location:358 → 478
    SPRY_RING; SPRY domain at N-terminus of Really Interesting New Gene (RING) finger domain
    cd16566
    Location:524 → 564
    RING-HC_RSPRY1; RING finger, HC subclass, found in RING finger and SPRY domain-containing protein 1 (RSPRY1) and similar proteins
Nucleotide Protein
Heading Accession and Version

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