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ZBED9-AS1 ZBED9 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 121676925, updated on 4-Jan-2025

Summary

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Official Symbol
ZBED9-AS1provided by HGNC
Official Full Name
ZBED9 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:55596
See related
Ensembl:ENSG00000246350 AllianceGenome:HGNC:55596
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Predicted to enable triplet codon-amino acid adaptor activity. Predicted to be involved in translation. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See ZBED9-AS1 in Genome Data Viewer
Location:
6p22.1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (28587378..28591749)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (28458752..28463121)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (28555155..28559526)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene tRNA-Ile (anticodon TAT) 3-1 Neighboring gene uncharacterized LOC107986586 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:28511751-28512333 Neighboring gene tRNA-Arg (anticodon TCG) 5-1 Neighboring gene SCAN domain containing 3 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:28554695-28555571 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr6:28557063-28557742 Neighboring gene tRNA-Gln (anticodon TTG) 2-1 Neighboring gene tRNA-Ser (anticodon GCT) 4-1 Neighboring gene tRNA-Ala (anticodon AGC) 3-1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See Variation Viewer (GRCh37.p13)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_186619.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL049543
    Related
    ENST00000499525.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    28587378..28591749
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_2

Genomic

  1. NT_113891.3 Reference GRCh38.p14 ALT_REF_LOCI_2

    Range
    77254..81622
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    28458752..28463121
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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