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LOC122213413 T-complex protein 1 subunit zeta-like [ Panthera leo (lion) ]

Gene ID: 122213413, updated on 16-Nov-2023

Summary

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Gene symbol
LOC122213413
Gene description
T-complex protein 1 subunit zeta-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera leo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
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Genomic context

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See LOC122213413 in Genome Data Viewer
Location:
chromosome: A2
Exon count:
1
Annotation release Status Assembly Chr Location
100 current P.leo_Ple1_pat1.1 (GCF_018350215.1) A2 NC_056680.1 (43740748..43742464)

Chromosome A2 - NC_056680.1Genomic Context describing neighboring genes Neighboring gene contactin 6 Neighboring gene rRNA-processing protein FCF1 homolog Neighboring gene U6 spliceosomal RNA Neighboring gene contactin 4 Neighboring gene uncharacterized LOC122214589

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056680.1 Chromosome A2 Reference P.leo_Ple1_pat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent protein folding chaperone IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chaperonin-containing T-complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: T-complex protein 1 subunit zeta-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera leo Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.leo_Ple1_pat1.1 Primary Assembly

Genomic

  1. NC_056680.1 Reference P.leo_Ple1_pat1.1 Primary Assembly

    Range
    43740748..43742464
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042927537.1 → XP_042783471.1  LOW QUALITY PROTEIN: T-complex protein 1 subunit zeta-like

    UniProtKB/TrEMBL
    A0A8C8XJI6
    Conserved Domains (1) summary
    TIGR02347
    Location:3 → 529
    chap_CCT_zeta; T-complex protein 1, zeta subunit
Nucleotide Protein
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