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LOC123355456 myotubularin-related protein 9-like [ Mauremys mutica (yellowpond turtle) ]

Gene ID: 123355456, updated on 30-Nov-2023

Summary

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Gene symbol
LOC123355456
Gene description
myotubularin-related protein 9-like
Locus tag
KIL84_021510
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys mutica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
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Genomic context

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See LOC123355456 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
14
Annotation release Status Assembly Chr Location
100 current ASM2049712v1 (GCF_020497125.1) 23 NC_059094.1 (15083513..15097696, complement)

Chromosome 23 - NC_059094.1Genomic Context describing neighboring genes Neighboring gene IQ motif containing C Neighboring gene doublecortin domain containing 2B Neighboring gene transmembrane protein 234 Neighboring gene eukaryotic translation initiation factor 3 subunit I Neighboring gene family with sequence similarity 167 member B Neighboring gene uncharacterized LOC123355514 Neighboring gene LCK proto-oncogene, Src family tyrosine kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_059094.1 Chromosome 23 Reference ASM2049712v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myotubularin-related protein 9-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys mutica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2049712v1 Primary Assembly

Genomic

  1. NC_059094.1 Reference ASM2049712v1 Primary Assembly

    Range
    15083513..15097696 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044997956.1 → XP_044853891.1  myotubularin-related protein 9-like isoform X1

    UniProtKB/TrEMBL
    A0A9D4AZY7
    Conserved Domains (2) summary
    cd13211
    Location:1 → 122
    PH-GRAM_MTMR9; Myotubularian (MTM) related 9 protein (MTMR9) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    cd14536
    Location:208 → 431
    PTP-MTMR9; protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 9

  2. XM_044997957.1 → XP_044853892.1  myotubularin-related protein 9-like isoform X1

    UniProtKB/TrEMBL
    A0A9D4AZY7
    Conserved Domains (2) summary
    cd13211
    Location:1 → 122
    PH-GRAM_MTMR9; Myotubularian (MTM) related 9 protein (MTMR9) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    cd14536
    Location:208 → 431
    PTP-MTMR9; protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 9

  3. XM_044997955.1 → XP_044853890.1  myotubularin-related protein 9-like isoform X1

    UniProtKB/TrEMBL
    A0A9D4AZY7
    Conserved Domains (2) summary
    cd13211
    Location:1 → 122
    PH-GRAM_MTMR9; Myotubularian (MTM) related 9 protein (MTMR9) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    cd14536
    Location:208 → 431
    PTP-MTMR9; protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 9

  4. XM_044997958.1 → XP_044853893.1  myotubularin-related protein 9-like isoform X2

    Conserved Domains (2) summary
    cd13211
    Location:1 → 102
    PH-GRAM_MTMR9; Myotubularian (MTM) related 9 protein (MTMR9) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    cd14536
    Location:188 → 411
    PTP-MTMR9; protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 9

  5. XM_044997959.1 → XP_044853894.1  myotubularin-related protein 9-like isoform X3

    Conserved Domains (1) summary
    cd14536
    Location:98 → 321
    PTP-MTMR9; protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 9
Nucleotide Protein
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