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LOC124900418 collagen alpha-1(I) chain-like [ Homo sapiens (human) ]

Gene ID: 124900418, updated on 27-Aug-2024

Summary

Gene symbol
LOC124900418
Gene description
collagen alpha-1(I) chain-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See LOC124900418 in Genome Data Viewer
Location:
19p13.12
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (15828947..15837380)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (15957070..15965130)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 10 subfamily H member 1 Neighboring gene zinc finger protein 861, pseudogene Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr19:15939001-15940200 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr19:15945748-15946947 Neighboring gene urothelial cancer associated 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10287 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14192 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14193 Neighboring gene C-type lectin domain family 4 member O, pseudogene Neighboring gene Sharpr-MPRA regulatory region 12980 Neighboring gene cytochrome P450 family 4 subfamily F member 36, pseudogene

Genomic regions, transcripts, and products

General protein information

Preferred Names
collagen alpha-1(I) chain-like; uncharacterized protein LOC124900418

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

    Range
    15828947..15837380
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047439793.1XP_047295749.1  uncharacterized protein LOC124900418 isoform X2

  2. XM_047439792.1XP_047295748.1  uncharacterized protein LOC124900418 isoform X2

  3. XM_047439791.1XP_047295747.1  collagen alpha-1(I) chain-like isoform X1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060943.1 Alternate T2T-CHM13v2.0

    Range
    15957070..15965130
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054322801.1XP_054178776.1  uncharacterized protein LOC124900418 isoform X2

  2. XM_054322800.1XP_054178775.1  uncharacterized protein LOC124900418 isoform X2