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LOC124901536 small nucleolar RNA U13 [ Homo sapiens (human) ]

Gene ID: 124901536, updated on 27-Aug-2024

Summary

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Gene symbol
LOC124901536
Gene description
small nucleolar RNA U13
Gene type
snoRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC124901536 in Genome Data Viewer
Location:
6q15
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (89823295..89823396)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (91032653..91032754)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene midasin AAA ATPase 1 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:90509087-90509820 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:90510674-90511174 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:90511175-90511675 Neighboring gene DnaJ heat shock protein family (Hsp40) member C19 pseudogene 6 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:90526731-90527350 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:90527351-90527970 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:90527971-90528590 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:90529211-90529830 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:90529831-90530450 Neighboring gene PIMREG pseudogene 3 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17396 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24832 Neighboring gene caspase 8 associated protein 2 Neighboring gene ribosomal protein L22 pseudogene 14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

General gene information

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Homology

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    89823295..89823396
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007059967.1 RNA Sequence

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_017363815.1 Reference GRCh38.p14 PATCHES

    Range
    18640..18741
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007069021.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    91032653..91032754
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007077519.1 RNA Sequence

Nucleotide Protein
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