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LOC124902833 small nucleolar RNA U13 [ Homo sapiens (human) ]

Gene ID: 124902833, updated on 27-Aug-2024

Summary

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Gene symbol
LOC124902833
Gene description
small nucleolar RNA U13
Gene type
snoRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC124902833 in Genome Data Viewer
Location:
11q13.2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (66152621..66152725)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (66146747..66146851)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3570 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5026 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:65818833-65819384 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3571 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5028 Neighboring gene galactose-3-O-sulfotransferase 3 Neighboring gene small nucleolar RNA, C/D box 13F Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5029 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3572 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3573 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3574 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3575 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3576 Neighboring gene ReSE screen-validated silencer GRCh37_chr11:65838483-65838687 Neighboring gene splicing factor 3b subunit 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5030 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5031 Neighboring gene phosphofurin acidic cluster sorting protein 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:65866985-65867894 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:65867895-65868802 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:65874431-65875274 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5034 Neighboring gene Sharpr-MPRA regulatory region 6316 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:65894813-65895472 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3579 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3580 Neighboring gene uncharacterized LOC105369354 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5036 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:65990246-65990746 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:65990747-65991247 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:66006167-66006678 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:66006679-66007190 Neighboring gene uncharacterized LOC124902694 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:66021063-66021564 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3581 Neighboring gene kinesin light chain 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    66152621..66152725
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007063018.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    66146747..66146851
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007082523.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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