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LOC124906172 small nucleolar RNA U13 [ Homo sapiens (human) ]

Gene ID: 124906172, updated on 27-Aug-2024

Summary

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Gene symbol
LOC124906172
Gene description
small nucleolar RNA U13
Gene type
snoRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC124906172 in Genome Data Viewer
Location:
2p14
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (64908587..64908686, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (64918203..64918302, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15910 Neighboring gene long intergenic non-protein coding RNA 1800 Neighboring gene Sharpr-MPRA regulatory region 2197 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:65087040-65087243 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15911 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11569 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:65103167-65103373 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:65131242-65131436 Neighboring gene Sharpr-MPRA regulatory region 15627 Neighboring gene long intergenic non-protein coding RNA 2245 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15912 Neighboring gene RNA, 7SL, cytoplasmic 211, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15913 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15914 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15915 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15916 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15917 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15918 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15919 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:65165275-65165830 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15920 Neighboring gene ribosomal protein L11 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15921 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15922 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11570 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:65216535-65217119 Neighboring gene RNA, U6 small nuclear 548, pseudogene Neighboring gene solute carrier family 1 member 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    64908587..64908686 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007088759.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    64918203..64918302 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007073089.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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