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lom Lom outer membrane protein [ Enterobacteria phage VT2-Sakai ]

Gene ID: 1262247, updated on 31-May-2023

Summary

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Gene symbol
lom
Gene description
Lom outer membrane protein
Locus tag
VT2-Sap67
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Enterobacteria phage VT2-Sakai (nat-host: Escherichia coli O157:H7, synonym: Bacteriophage VT2-Sa)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Sepvirinae; Traversvirus
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Genomic context

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Sequence:
NC_000902.1 (43734..44468)

NC_000902.1Genomic Context describing neighboring genes Neighboring gene outer membrane protein Neighboring gene membrane associated protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000902.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence analysis of Stx2-converting phage VT2-Sa shows a great divergence in early regulation and replication regions. Miyamoto H, et al. DNA Res, 1999 Aug 31. PMID 10492170

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
Lom outer membrane protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000902.1 Reference assembly

    Range
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_050564.1 Lom outer membrane protein [Enterobacteria phage VT2-Sakai]

    See identical proteins and their annotated locations for NP_050564.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0N6WEQ0, A0A0N6WEV6, A0A0N7BSH9, A0A0N7BST7, A0A0N7BTV5, A0A0N7BUL5, A0A0N7BVB7, A0A0N7C0K9, A0A0N7C163, A0A0N7C1F6, A0A0N7C1L9, A0A0N7C208, A0A0N7C2B4, A0A0N7C2G8, A0A0N7C338, A0A0N7C356, A0A0N7C3V0, A0A0N7CBX3, A0A0N7CC41, Q776N5, Q7Y2U3, Q9KXB2
    Conserved Domains (1) summary
    cl21487
    Location:1 → 244
    OM_channels; Porin superfamily. These outer membrane channels share a beta-barrel structure that differ in strand and shear number. Classical (gram-negative ) porins are non-specific channels for small hydrophillic molecules and form 16 beta-stranded barrels (16,20) ...
Nucleotide Protein
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